Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23280 and AZOBR_RS23285 are separated by 302 nucleotides AZOBR_RS23285 and AZOBR_RS23290 are separated by 2 nucleotides AZOBR_RS23290 and AZOBR_RS23295 are separated by 146 nucleotides
AZOBR_RS23280: AZOBR_RS23280 - carboxymuconolactone decarboxylase, at 249,848 to 250,168
_RS23280
AZOBR_RS23285: AZOBR_RS23285 - Dak phosphatase, at 250,471 to 251,085
_RS23285
AZOBR_RS23290: AZOBR_RS23290 - dihydroxyacetone kinase subunit K, at 251,088 to 252,086
_RS23290
AZOBR_RS23295: AZOBR_RS23295 - transcriptional regulator, at 252,233 to 253,039
_RS23295
Position (kb) 251
252
253 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 250.154 kb on + strand at 250.166 kb on + strand at 250.166 kb on + strand at 250.166 kb on + strand at 250.167 kb on - strand at 250.191 kb on + strand at 250.191 kb on + strand at 250.192 kb on - strand at 250.192 kb on - strand at 250.192 kb on - strand at 250.192 kb on - strand at 250.556 kb on + strand, within AZOBR_RS23285 at 250.556 kb on + strand, within AZOBR_RS23285 at 250.556 kb on + strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.557 kb on - strand, within AZOBR_RS23285 at 250.708 kb on - strand, within AZOBR_RS23285 at 250.845 kb on + strand, within AZOBR_RS23285 at 251.200 kb on + strand, within AZOBR_RS23290 at 251.200 kb on + strand, within AZOBR_RS23290 at 251.200 kb on + strand, within AZOBR_RS23290 at 251.200 kb on + strand, within AZOBR_RS23290 at 251.614 kb on + strand, within AZOBR_RS23290 at 251.614 kb on + strand, within AZOBR_RS23290 at 251.615 kb on - strand, within AZOBR_RS23290 at 251.620 kb on + strand, within AZOBR_RS23290 at 251.620 kb on + strand, within AZOBR_RS23290 at 251.620 kb on + strand, within AZOBR_RS23290 at 251.767 kb on + strand, within AZOBR_RS23290 at 251.767 kb on + strand, within AZOBR_RS23290 at 251.768 kb on - strand, within AZOBR_RS23290 at 251.776 kb on + strand, within AZOBR_RS23290 at 252.056 kb on - strand at 252.056 kb on - strand at 252.544 kb on - strand, within AZOBR_RS23295 at 252.771 kb on + strand, within AZOBR_RS23295
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 250,154 + -0.8 250,166 + -1.2 250,166 + +0.7 250,166 + +0.4 250,167 - -0.3 250,191 + +1.4 250,191 + -0.0 250,192 - +0.7 250,192 - -0.8 250,192 - +0.9 250,192 - +0.2 250,556 + AZOBR_RS23285 0.14 +1.4 250,556 + AZOBR_RS23285 0.14 +1.3 250,556 + AZOBR_RS23285 0.14 +0.7 250,557 - AZOBR_RS23285 0.14 -1.5 250,557 - AZOBR_RS23285 0.14 +0.2 250,557 - AZOBR_RS23285 0.14 +0.5 250,557 - AZOBR_RS23285 0.14 +0.7 250,557 - AZOBR_RS23285 0.14 +0.9 250,557 - AZOBR_RS23285 0.14 +1.1 250,557 - AZOBR_RS23285 0.14 +0.9 250,557 - AZOBR_RS23285 0.14 +0.6 250,708 - AZOBR_RS23285 0.39 -0.4 250,845 + AZOBR_RS23285 0.61 -3.3 251,200 + AZOBR_RS23290 0.11 -2.7 251,200 + AZOBR_RS23290 0.11 -2.3 251,200 + AZOBR_RS23290 0.11 +0.8 251,200 + AZOBR_RS23290 0.11 -0.6 251,614 + AZOBR_RS23290 0.53 +1.3 251,614 + AZOBR_RS23290 0.53 -0.1 251,615 - AZOBR_RS23290 0.53 -2.3 251,620 + AZOBR_RS23290 0.53 +0.1 251,620 + AZOBR_RS23290 0.53 +0.5 251,620 + AZOBR_RS23290 0.53 -2.7 251,767 + AZOBR_RS23290 0.68 +1.0 251,767 + AZOBR_RS23290 0.68 +1.3 251,768 - AZOBR_RS23290 0.68 +0.7 251,776 + AZOBR_RS23290 0.69 -0.0 252,056 - -0.2 252,056 - -1.4 252,544 - AZOBR_RS23295 0.39 -3.9 252,771 + AZOBR_RS23295 0.67 -0.9
Or see this region's nucleotide sequence