Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18515 and AZOBR_RS18520 are separated by 40 nucleotides AZOBR_RS18520 and AZOBR_RS18525 are separated by 40 nucleotides AZOBR_RS18525 and AZOBR_RS18530 are separated by 52 nucleotides AZOBR_RS18530 and AZOBR_RS18535 are separated by 78 nucleotides
AZOBR_RS18515: AZOBR_RS18515 - chromosome partitioning protein, at 924,253 to 925,005
_RS18515
AZOBR_RS18520: AZOBR_RS18520 - chromosome partitioning protein, at 925,046 to 925,927
_RS18520
AZOBR_RS18525: AZOBR_RS18525 - uracil-DNA glycosylase, at 925,968 to 926,504
_RS18525
AZOBR_RS18530: AZOBR_RS18530 - hypothetical protein, at 926,557 to 927,273
_RS18530
AZOBR_RS18535: AZOBR_RS18535 - LysR family transcriptional regulator, at 927,352 to 928,260
_RS18535
Position (kb) 925
926
927 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 926.153 kb on - strand, within AZOBR_RS18525 at 926.153 kb on - strand, within AZOBR_RS18525 at 926.398 kb on + strand, within AZOBR_RS18525 at 926.399 kb on - strand, within AZOBR_RS18525 at 926.558 kb on + strand at 926.985 kb on - strand, within AZOBR_RS18530 at 926.990 kb on + strand, within AZOBR_RS18530 at 926.990 kb on + strand, within AZOBR_RS18530 at 926.991 kb on - strand, within AZOBR_RS18530 at 927.158 kb on + strand, within AZOBR_RS18530 at 927.159 kb on - strand, within AZOBR_RS18530 at 927.307 kb on + strand at 927.308 kb on - strand at 927.308 kb on - strand at 927.440 kb on + strand at 927.441 kb on - strand at 927.441 kb on - strand at 927.441 kb on - strand at 927.441 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 926,153 - AZOBR_RS18525 0.34 -0.6 926,153 - AZOBR_RS18525 0.34 +1.0 926,398 + AZOBR_RS18525 0.80 -3.8 926,399 - AZOBR_RS18525 0.80 +0.7 926,558 + +1.0 926,985 - AZOBR_RS18530 0.60 +0.4 926,990 + AZOBR_RS18530 0.60 +1.3 926,990 + AZOBR_RS18530 0.60 -0.0 926,991 - AZOBR_RS18530 0.61 +0.9 927,158 + AZOBR_RS18530 0.84 -0.9 927,159 - AZOBR_RS18530 0.84 +0.4 927,307 + +1.2 927,308 - +0.9 927,308 - +0.1 927,440 + -1.4 927,441 - +0.6 927,441 - +1.1 927,441 - -0.0 927,441 - +0.9
Or see this region's nucleotide sequence