Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS13240

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,800,200	+		AZOBR_RS13235	0.27	+0.5
2,800,314	+		AZOBR_RS13235	0.37	-0.9
2,800,359	+		AZOBR_RS13235	0.40	-2.4
2,800,359	+		AZOBR_RS13235	0.40	-1.6
2,800,360	-		AZOBR_RS13235	0.40	-3.4
2,800,360	-		AZOBR_RS13235	0.40	-3.9
2,800,360	-		AZOBR_RS13235	0.40	+0.3
2,800,360	-		AZOBR_RS13235	0.40	+1.4
2,800,476	+		AZOBR_RS13235	0.50	+0.1
2,800,477	-		AZOBR_RS13235	0.50	-1.2
2,800,477	-		AZOBR_RS13235	0.50	+0.1
2,800,477	-		AZOBR_RS13235	0.50	+1.4
2,800,519	-		AZOBR_RS13235	0.53	-0.1
2,800,519	-		AZOBR_RS13235	0.53	+1.1
2,800,620	+		AZOBR_RS13235	0.62	+0.8
2,800,713	+		AZOBR_RS13235	0.69	+0.0
2,800,713	+		AZOBR_RS13235	0.69	+0.9
2,800,713	+		AZOBR_RS13235	0.69	-0.2
2,800,714	-		AZOBR_RS13235	0.69	-0.1
2,800,866	+		AZOBR_RS13235	0.82	-0.3
2,800,866	+		AZOBR_RS13235	0.82	-0.8
2,800,866	+		AZOBR_RS13235	0.82	+1.2
2,800,866	+		AZOBR_RS13235	0.82	+1.3
2,800,867	-		AZOBR_RS13235	0.82	-0.2
2,800,867	-		AZOBR_RS13235	0.82	+0.6
2,801,010	+				+0.2
2,801,011	-				-2.2
2,801,011	-				-2.7
2,801,011	-				+0.5
2,801,011	-				+0.6
2,801,314	+				-0.9
2,801,315	-				-1.3
2,801,315	-				+0.2
2,801,315	-				+1.1
2,801,357	+		AZOBR_RS13240	0.11	-0.6
2,801,359	+		AZOBR_RS13240	0.11	+0.0
2,801,359	+		AZOBR_RS13240	0.11	+0.6
2,801,360	-		AZOBR_RS13240	0.11	+1.4
2,801,360	-		AZOBR_RS13240	0.11	-2.8
2,801,360	-		AZOBR_RS13240	0.11	+1.3
2,801,360	-		AZOBR_RS13240	0.11	-2.4
2,801,498	+		AZOBR_RS13240	0.20	+0.7
2,801,498	+		AZOBR_RS13240	0.20	+0.5
2,801,498	+		AZOBR_RS13240	0.20	+0.5
2,801,499	-		AZOBR_RS13240	0.21	-0.4
2,801,499	-		AZOBR_RS13240	0.21	-2.0
2,801,499	-		AZOBR_RS13240	0.21	+1.2
2,801,499	-		AZOBR_RS13240	0.21	-1.8
2,801,499	-		AZOBR_RS13240	0.21	+0.2
2,801,500	+		AZOBR_RS13240	0.21	-0.4
2,801,500	+		AZOBR_RS13240	0.21	+2.6
2,801,501	-		AZOBR_RS13240	0.21	-0.0
2,801,501	-		AZOBR_RS13240	0.21	-0.2
2,801,740	+		AZOBR_RS13240	0.37	-0.1
2,801,740	+		AZOBR_RS13240	0.37	-3.5
2,802,088	+		AZOBR_RS13240	0.60	+1.7
2,802,088	+		AZOBR_RS13240	0.60	+0.4
2,802,088	+		AZOBR_RS13240	0.60	-0.3
2,802,088	+		AZOBR_RS13240	0.60	-0.5
2,802,089	-		AZOBR_RS13240	0.61	+0.3
2,802,089	-		AZOBR_RS13240	0.61	-2.6
2,802,089	-		AZOBR_RS13240	0.61	-0.1
2,802,089	-		AZOBR_RS13240	0.61	+1.1
2,802,160	+		AZOBR_RS13240	0.65	+0.7
2,802,160	+		AZOBR_RS13240	0.65	+1.7
2,802,160	+		AZOBR_RS13240	0.65	-0.8
2,802,314	-		AZOBR_RS13240	0.76	+0.4
2,802,314	-		AZOBR_RS13240	0.76	-1.5
2,802,319	+		AZOBR_RS13240	0.76	+0.5
2,802,319	+		AZOBR_RS13240	0.76	-3.3
2,802,320	-		AZOBR_RS13240	0.76	-1.9
2,802,320	-		AZOBR_RS13240	0.76	+0.3
2,802,346	+		AZOBR_RS13240	0.78	-1.8
2,802,349	+		AZOBR_RS13240	0.78	-0.0
2,802,349	+		AZOBR_RS13240	0.78	+0.2
2,802,349	+		AZOBR_RS13240	0.78	-2.8
2,802,350	-		AZOBR_RS13240	0.78	+0.7
2,802,350	-		AZOBR_RS13240	0.78	+0.5
2,802,350	-		AZOBR_RS13240	0.78	+0.3
2,802,350	-		AZOBR_RS13240	0.78	-0.9
2,802,350	-		AZOBR_RS13240	0.78	-0.5
2,802,494	-		AZOBR_RS13240	0.88	+2.8
2,802,494	-		AZOBR_RS13240	0.88	-3.4
2,802,577	+				+0.3
2,802,578	-				+0.0
2,802,578	-				-0.6
2,802,578	-				+1.7
2,802,578	-				+0.2
2,802,578	-				+1.0
2,802,734	+				-3.0
2,802,905	+		AZOBR_RS13245	0.18	+0.3
2,802,905	+		AZOBR_RS13245	0.18	-0.3
2,802,905	+		AZOBR_RS13245	0.18	+1.1
2,802,905	+		AZOBR_RS13245	0.18	+0.9
2,802,906	-		AZOBR_RS13245	0.18	+0.2
2,802,906	-		AZOBR_RS13245	0.18	+1.4
2,802,906	-		AZOBR_RS13245	0.18	+1.1
2,803,080	+		AZOBR_RS13245	0.36	+0.7
2,803,080	+		AZOBR_RS13245	0.36	-1.9
2,803,080	+		AZOBR_RS13245	0.36	+0.7
2,803,080	+		AZOBR_RS13245	0.36	-0.5
2,803,080	+		AZOBR_RS13245	0.36	-2.8
2,803,081	-		AZOBR_RS13245	0.36	+0.2
2,803,081	-		AZOBR_RS13245	0.36	+1.4
2,803,081	-		AZOBR_RS13245	0.36	+1.1
2,803,115	+		AZOBR_RS13245	0.40	+0.7
2,803,115	+		AZOBR_RS13245	0.40	+0.3
2,803,115	+		AZOBR_RS13245	0.40	+0.7
2,803,116	-		AZOBR_RS13245	0.40	-0.1
2,803,116	-		AZOBR_RS13245	0.40	-0.7
2,803,116	-		AZOBR_RS13245	0.40	+0.2
2,803,116	-		AZOBR_RS13245	0.40	+0.2
2,803,116	-		AZOBR_RS13245	0.40	-0.1
2,803,116	-		AZOBR_RS13245	0.40	+1.3
2,803,116	-		AZOBR_RS13245	0.40	-0.3
2,803,305	-		AZOBR_RS13245	0.60	-2.8
2,803,433	+		AZOBR_RS13245	0.73	-0.3
2,803,434	-		AZOBR_RS13245	0.73	-4.0