Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS12240 and AZOBR_RS12245 are separated by 270 nucleotides AZOBR_RS12245 and AZOBR_RS12250 are separated by 124 nucleotides
AZOBR_RS12240: AZOBR_RS12240 - 2-hydroxy-acid oxidase, at 2,567,974 to 2,569,377
_RS12240
AZOBR_RS12245: AZOBR_RS12245 - 5-oxoprolinase, at 2,569,648 to 2,573,256
_RS12245
AZOBR_RS12250: AZOBR_RS12250 - GCN5 family acetyltransferase, at 2,573,381 to 2,573,935
_RS12250
Position (kb)
2569
2570
2571
2572
2573
2574 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2568.713 kb on + strand, within AZOBR_RS12240 at 2568.786 kb on - strand, within AZOBR_RS12240 at 2569.245 kb on - strand at 2569.245 kb on - strand at 2569.245 kb on - strand at 2569.245 kb on - strand at 2569.425 kb on - strand at 2569.439 kb on + strand at 2569.439 kb on + strand at 2569.586 kb on - strand at 2569.586 kb on - strand at 2569.611 kb on + strand at 2570.069 kb on + strand, within AZOBR_RS12245 at 2570.069 kb on + strand, within AZOBR_RS12245 at 2570.069 kb on + strand, within AZOBR_RS12245 at 2570.070 kb on - strand, within AZOBR_RS12245 at 2570.073 kb on - strand, within AZOBR_RS12245 at 2570.309 kb on + strand, within AZOBR_RS12245 at 2570.310 kb on - strand, within AZOBR_RS12245 at 2570.828 kb on + strand, within AZOBR_RS12245 at 2570.829 kb on - strand, within AZOBR_RS12245 at 2570.829 kb on - strand, within AZOBR_RS12245 at 2570.907 kb on - strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.924 kb on + strand, within AZOBR_RS12245 at 2570.925 kb on - strand, within AZOBR_RS12245 at 2570.925 kb on - strand, within AZOBR_RS12245 at 2570.925 kb on - strand, within AZOBR_RS12245 at 2571.092 kb on + strand, within AZOBR_RS12245 at 2571.093 kb on - strand, within AZOBR_RS12245 at 2571.709 kb on - strand, within AZOBR_RS12245 at 2571.709 kb on - strand, within AZOBR_RS12245 at 2571.908 kb on + strand, within AZOBR_RS12245 at 2571.908 kb on + strand, within AZOBR_RS12245 at 2571.909 kb on - strand, within AZOBR_RS12245 at 2571.909 kb on - strand, within AZOBR_RS12245 at 2572.191 kb on - strand, within AZOBR_RS12245 at 2572.352 kb on + strand, within AZOBR_RS12245 at 2572.352 kb on + strand, within AZOBR_RS12245 at 2572.353 kb on - strand, within AZOBR_RS12245 at 2572.353 kb on - strand, within AZOBR_RS12245 at 2572.353 kb on - strand, within AZOBR_RS12245 at 2572.580 kb on + strand, within AZOBR_RS12245 at 2572.580 kb on + strand, within AZOBR_RS12245 at 2572.604 kb on + strand, within AZOBR_RS12245 at 2572.605 kb on - strand, within AZOBR_RS12245 at 2572.605 kb on - strand, within AZOBR_RS12245 at 2572.784 kb on + strand, within AZOBR_RS12245 at 2572.884 kb on - strand, within AZOBR_RS12245 at 2573.314 kb on - strand at 2573.314 kb on - strand at 2573.314 kb on - strand at 2573.417 kb on + strand at 2574.192 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,568,713 + AZOBR_RS12240 0.53 +0.1 2,568,786 - AZOBR_RS12240 0.58 -3.5 2,569,245 - -0.8 2,569,245 - -2.0 2,569,245 - +0.9 2,569,245 - +0.5 2,569,425 - +0.6 2,569,439 + +0.6 2,569,439 + -0.5 2,569,586 - +0.5 2,569,586 - +0.1 2,569,611 + -1.1 2,570,069 + AZOBR_RS12245 0.12 -0.6 2,570,069 + AZOBR_RS12245 0.12 +1.3 2,570,069 + AZOBR_RS12245 0.12 -1.1 2,570,070 - AZOBR_RS12245 0.12 +1.7 2,570,073 - AZOBR_RS12245 0.12 -0.7 2,570,309 + AZOBR_RS12245 0.18 +0.6 2,570,310 - AZOBR_RS12245 0.18 +0.7 2,570,828 + AZOBR_RS12245 0.33 +0.4 2,570,829 - AZOBR_RS12245 0.33 -0.7 2,570,829 - AZOBR_RS12245 0.33 +1.7 2,570,907 - AZOBR_RS12245 0.35 -3.4 2,570,924 + AZOBR_RS12245 0.35 -2.5 2,570,924 + AZOBR_RS12245 0.35 +1.1 2,570,924 + AZOBR_RS12245 0.35 +0.5 2,570,924 + AZOBR_RS12245 0.35 +0.5 2,570,924 + AZOBR_RS12245 0.35 +0.0 2,570,924 + AZOBR_RS12245 0.35 -1.0 2,570,924 + AZOBR_RS12245 0.35 +0.8 2,570,924 + AZOBR_RS12245 0.35 +0.2 2,570,925 - AZOBR_RS12245 0.35 +0.1 2,570,925 - AZOBR_RS12245 0.35 -2.1 2,570,925 - AZOBR_RS12245 0.35 +0.3 2,571,092 + AZOBR_RS12245 0.40 +0.9 2,571,093 - AZOBR_RS12245 0.40 +0.4 2,571,709 - AZOBR_RS12245 0.57 +0.1 2,571,709 - AZOBR_RS12245 0.57 +0.1 2,571,908 + AZOBR_RS12245 0.63 +0.2 2,571,908 + AZOBR_RS12245 0.63 +0.1 2,571,909 - AZOBR_RS12245 0.63 -0.6 2,571,909 - AZOBR_RS12245 0.63 +0.4 2,572,191 - AZOBR_RS12245 0.70 +0.8 2,572,352 + AZOBR_RS12245 0.75 -4.0 2,572,352 + AZOBR_RS12245 0.75 +0.9 2,572,353 - AZOBR_RS12245 0.75 +1.0 2,572,353 - AZOBR_RS12245 0.75 -3.6 2,572,353 - AZOBR_RS12245 0.75 -0.4 2,572,580 + AZOBR_RS12245 0.81 +0.6 2,572,580 + AZOBR_RS12245 0.81 -0.3 2,572,604 + AZOBR_RS12245 0.82 +1.7 2,572,605 - AZOBR_RS12245 0.82 +0.3 2,572,605 - AZOBR_RS12245 0.82 +0.2 2,572,784 + AZOBR_RS12245 0.87 +0.9 2,572,884 - AZOBR_RS12245 0.90 -0.8 2,573,314 - -0.3 2,573,314 - +0.8 2,573,314 - +0.6 2,573,417 + -0.7 2,574,192 - +0.3
Or see this region's nucleotide sequence