Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10715 and AZOBR_RS10720 are separated by 136 nucleotides AZOBR_RS10720 and AZOBR_RS10725 are separated by 171 nucleotides
AZOBR_RS10715: AZOBR_RS10715 - membrane protein, at 2,250,938 to 2,252,284
_RS10715
AZOBR_RS10720: AZOBR_RS10720 - enoyl-ACP reductase, at 2,252,421 to 2,253,269
_RS10720
AZOBR_RS10725: AZOBR_RS10725 - hypothetical protein, at 2,253,441 to 2,254,604
_RS10725
Position (kb)
2252
2253
2254 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2251.539 kb on + strand, within AZOBR_RS10715 at 2251.539 kb on + strand, within AZOBR_RS10715 at 2251.540 kb on - strand, within AZOBR_RS10715 at 2251.581 kb on + strand, within AZOBR_RS10715 at 2251.582 kb on - strand at 2251.593 kb on + strand, within AZOBR_RS10715 at 2251.614 kb on + strand, within AZOBR_RS10715 at 2251.614 kb on + strand, within AZOBR_RS10715 at 2251.614 kb on + strand, within AZOBR_RS10715 at 2251.614 kb on + strand, within AZOBR_RS10715 at 2251.614 kb on + strand, within AZOBR_RS10715 at 2251.615 kb on - strand, within AZOBR_RS10715 at 2251.615 kb on - strand, within AZOBR_RS10715 at 2251.615 kb on - strand, within AZOBR_RS10715 at 2251.615 kb on - strand, within AZOBR_RS10715 at 2251.615 kb on - strand, within AZOBR_RS10715 at 2251.716 kb on + strand, within AZOBR_RS10715 at 2251.908 kb on + strand, within AZOBR_RS10715 at 2251.908 kb on + strand, within AZOBR_RS10715 at 2251.908 kb on + strand, within AZOBR_RS10715 at 2251.909 kb on - strand, within AZOBR_RS10715 at 2252.193 kb on + strand at 2252.194 kb on - strand at 2252.232 kb on + strand at 2252.398 kb on + strand at 2252.398 kb on + strand at 2253.374 kb on - strand at 2253.412 kb on + strand at 2253.412 kb on + strand at 2253.413 kb on - strand at 2253.633 kb on + strand, within AZOBR_RS10725 at 2253.633 kb on + strand, within AZOBR_RS10725 at 2253.702 kb on + strand, within AZOBR_RS10725 at 2253.702 kb on + strand, within AZOBR_RS10725 at 2253.703 kb on - strand, within AZOBR_RS10725 at 2253.703 kb on - strand, within AZOBR_RS10725 at 2253.703 kb on - strand, within AZOBR_RS10725 at 2253.703 kb on - strand, within AZOBR_RS10725 at 2253.703 kb on - strand, within AZOBR_RS10725 at 2253.750 kb on + strand, within AZOBR_RS10725 at 2253.751 kb on - strand, within AZOBR_RS10725 at 2254.167 kb on + strand, within AZOBR_RS10725 at 2254.167 kb on + strand, within AZOBR_RS10725 at 2254.167 kb on + strand, within AZOBR_RS10725 at 2254.167 kb on + strand, within AZOBR_RS10725 at 2254.167 kb on + strand, within AZOBR_RS10725
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,251,539 + AZOBR_RS10715 0.45 -4.8 2,251,539 + AZOBR_RS10715 0.45 -0.9 2,251,540 - AZOBR_RS10715 0.45 -0.0 2,251,581 + AZOBR_RS10715 0.48 +0.0 2,251,582 - -0.7 2,251,593 + AZOBR_RS10715 0.49 +0.2 2,251,614 + AZOBR_RS10715 0.50 -0.5 2,251,614 + AZOBR_RS10715 0.50 -1.3 2,251,614 + AZOBR_RS10715 0.50 -0.7 2,251,614 + AZOBR_RS10715 0.50 -0.2 2,251,614 + AZOBR_RS10715 0.50 -0.3 2,251,615 - AZOBR_RS10715 0.50 +1.0 2,251,615 - AZOBR_RS10715 0.50 -0.9 2,251,615 - AZOBR_RS10715 0.50 -1.7 2,251,615 - AZOBR_RS10715 0.50 -2.4 2,251,615 - AZOBR_RS10715 0.50 -3.3 2,251,716 + AZOBR_RS10715 0.58 -0.1 2,251,908 + AZOBR_RS10715 0.72 +1.0 2,251,908 + AZOBR_RS10715 0.72 -0.6 2,251,908 + AZOBR_RS10715 0.72 +0.2 2,251,909 - AZOBR_RS10715 0.72 -0.0 2,252,193 + +1.2 2,252,194 - -1.3 2,252,232 + -0.5 2,252,398 + -0.3 2,252,398 + +1.1 2,253,374 - +0.2 2,253,412 + +0.3 2,253,412 + -0.7 2,253,413 - -0.0 2,253,633 + AZOBR_RS10725 0.16 +0.2 2,253,633 + AZOBR_RS10725 0.16 -1.3 2,253,702 + AZOBR_RS10725 0.22 +1.1 2,253,702 + AZOBR_RS10725 0.22 -2.5 2,253,703 - AZOBR_RS10725 0.23 +1.2 2,253,703 - AZOBR_RS10725 0.23 +0.1 2,253,703 - AZOBR_RS10725 0.23 -1.4 2,253,703 - AZOBR_RS10725 0.23 -3.6 2,253,703 - AZOBR_RS10725 0.23 +0.1 2,253,750 + AZOBR_RS10725 0.27 -0.8 2,253,751 - AZOBR_RS10725 0.27 -2.9 2,254,167 + AZOBR_RS10725 0.62 +2.0 2,254,167 + AZOBR_RS10725 0.62 +2.4 2,254,167 + AZOBR_RS10725 0.62 -2.9 2,254,167 + AZOBR_RS10725 0.62 +0.0 2,254,167 + AZOBR_RS10725 0.62 -0.9
Or see this region's nucleotide sequence