Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10690 and AZOBR_RS10695 are separated by 232 nucleotides
AZOBR_RS10690: AZOBR_RS10690 - hypothetical protein, at 2,244,019 to 2,245,728
_RS10690
AZOBR_RS10695: AZOBR_RS10695 - potassium transporter TrkH, at 2,245,961 to 2,247,331
_RS10695
Position (kb)
2245
2246
2247
2248 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2245.019 kb on - strand, within AZOBR_RS10690 at 2245.133 kb on - strand, within AZOBR_RS10690 at 2245.321 kb on + strand, within AZOBR_RS10690 at 2245.322 kb on - strand, within AZOBR_RS10690 at 2245.465 kb on + strand, within AZOBR_RS10690 at 2245.465 kb on + strand, within AZOBR_RS10690 at 2245.465 kb on + strand, within AZOBR_RS10690 at 2245.465 kb on + strand, within AZOBR_RS10690 at 2245.465 kb on + strand, within AZOBR_RS10690 at 2245.466 kb on - strand at 2245.466 kb on - strand, within AZOBR_RS10690 at 2245.697 kb on - strand at 2246.183 kb on + strand, within AZOBR_RS10695 at 2246.184 kb on - strand, within AZOBR_RS10695 at 2246.184 kb on - strand, within AZOBR_RS10695 at 2246.187 kb on - strand, within AZOBR_RS10695 at 2246.187 kb on - strand, within AZOBR_RS10695 at 2246.438 kb on + strand, within AZOBR_RS10695 at 2246.439 kb on - strand, within AZOBR_RS10695 at 2246.439 kb on - strand, within AZOBR_RS10695 at 2246.439 kb on - strand, within AZOBR_RS10695 at 2246.471 kb on + strand, within AZOBR_RS10695 at 2246.471 kb on + strand, within AZOBR_RS10695 at 2246.640 kb on - strand, within AZOBR_RS10695 at 2246.742 kb on + strand, within AZOBR_RS10695 at 2246.742 kb on + strand, within AZOBR_RS10695 at 2246.892 kb on - strand at 2246.892 kb on - strand, within AZOBR_RS10695 at 2246.892 kb on - strand, within AZOBR_RS10695 at 2247.021 kb on - strand, within AZOBR_RS10695 at 2247.021 kb on - strand, within AZOBR_RS10695
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,245,019 - AZOBR_RS10690 0.58 -3.1 2,245,133 - AZOBR_RS10690 0.65 +0.2 2,245,321 + AZOBR_RS10690 0.76 +0.3 2,245,322 - AZOBR_RS10690 0.76 +0.5 2,245,465 + AZOBR_RS10690 0.85 -1.3 2,245,465 + AZOBR_RS10690 0.85 +1.7 2,245,465 + AZOBR_RS10690 0.85 +0.3 2,245,465 + AZOBR_RS10690 0.85 +0.9 2,245,465 + AZOBR_RS10690 0.85 -0.7 2,245,466 - +3.7 2,245,466 - AZOBR_RS10690 0.85 +1.2 2,245,697 - +0.3 2,246,183 + AZOBR_RS10695 0.16 +1.0 2,246,184 - AZOBR_RS10695 0.16 +0.2 2,246,184 - AZOBR_RS10695 0.16 +1.1 2,246,187 - AZOBR_RS10695 0.16 -3.5 2,246,187 - AZOBR_RS10695 0.16 +1.6 2,246,438 + AZOBR_RS10695 0.35 -2.9 2,246,439 - AZOBR_RS10695 0.35 -0.0 2,246,439 - AZOBR_RS10695 0.35 +0.4 2,246,439 - AZOBR_RS10695 0.35 +1.0 2,246,471 + AZOBR_RS10695 0.37 +0.8 2,246,471 + AZOBR_RS10695 0.37 +2.0 2,246,640 - AZOBR_RS10695 0.50 +1.5 2,246,742 + AZOBR_RS10695 0.57 +2.7 2,246,742 + AZOBR_RS10695 0.57 +1.0 2,246,892 - -1.1 2,246,892 - AZOBR_RS10695 0.68 +1.1 2,246,892 - AZOBR_RS10695 0.68 +0.2 2,247,021 - AZOBR_RS10695 0.77 -0.5 2,247,021 - AZOBR_RS10695 0.77 -2.1
Or see this region's nucleotide sequence