Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10255 and AZOBR_RS10260 are separated by 200 nucleotides AZOBR_RS10260 and AZOBR_RS10265 are separated by 277 nucleotides
AZOBR_RS10255: AZOBR_RS10255 - hypothetical protein, at 2,143,004 to 2,144,311
_RS10255
AZOBR_RS10260: AZOBR_RS10260 - hypothetical protein, at 2,144,512 to 2,147,739
_RS10260
AZOBR_RS10265: AZOBR_RS10265 - amino acid ABC transporter substrate-binding protein, at 2,148,017 to 2,148,856
_RS10265
Position (kb)
2144
2145
2146
2147
2148 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2144.363 kb on + strand at 2144.364 kb on - strand at 2144.364 kb on - strand at 2144.873 kb on + strand, within AZOBR_RS10260 at 2144.873 kb on + strand, within AZOBR_RS10260 at 2144.873 kb on + strand, within AZOBR_RS10260 at 2144.873 kb on + strand, within AZOBR_RS10260 at 2144.874 kb on - strand, within AZOBR_RS10260 at 2146.175 kb on + strand, within AZOBR_RS10260 at 2146.175 kb on + strand, within AZOBR_RS10260 at 2146.176 kb on - strand, within AZOBR_RS10260 at 2146.176 kb on - strand, within AZOBR_RS10260 at 2146.176 kb on - strand, within AZOBR_RS10260 at 2146.176 kb on - strand, within AZOBR_RS10260 at 2146.661 kb on + strand, within AZOBR_RS10260 at 2146.661 kb on + strand, within AZOBR_RS10260 at 2146.842 kb on + strand, within AZOBR_RS10260 at 2147.237 kb on + strand, within AZOBR_RS10260 at 2147.295 kb on - strand, within AZOBR_RS10260 at 2147.295 kb on - strand, within AZOBR_RS10260 at 2147.295 kb on - strand, within AZOBR_RS10260 at 2147.444 kb on + strand at 2147.444 kb on + strand at 2147.444 kb on + strand at 2147.445 kb on - strand at 2147.445 kb on - strand at 2147.811 kb on - strand at 2147.995 kb on + strand at 2148.102 kb on + strand, within AZOBR_RS10265 at 2148.102 kb on + strand, within AZOBR_RS10265 at 2148.103 kb on - strand, within AZOBR_RS10265 at 2148.103 kb on - strand, within AZOBR_RS10265 at 2148.103 kb on - strand, within AZOBR_RS10265 at 2148.191 kb on + strand at 2148.191 kb on + strand, within AZOBR_RS10265 at 2148.191 kb on + strand, within AZOBR_RS10265 at 2148.192 kb on - strand, within AZOBR_RS10265 at 2148.195 kb on - strand, within AZOBR_RS10265 at 2148.195 kb on - strand, within AZOBR_RS10265 at 2148.218 kb on + strand, within AZOBR_RS10265 at 2148.219 kb on - strand, within AZOBR_RS10265 at 2148.413 kb on + strand, within AZOBR_RS10265 at 2148.431 kb on + strand, within AZOBR_RS10265 at 2148.534 kb on - strand, within AZOBR_RS10265 at 2148.534 kb on - strand, within AZOBR_RS10265 at 2148.639 kb on - strand, within AZOBR_RS10265 at 2148.639 kb on - strand, within AZOBR_RS10265 at 2148.644 kb on + strand, within AZOBR_RS10265 at 2148.719 kb on + strand, within AZOBR_RS10265 at 2148.719 kb on + strand, within AZOBR_RS10265 at 2148.719 kb on + strand, within AZOBR_RS10265
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,144,363 + -0.6 2,144,364 - +1.6 2,144,364 - -1.0 2,144,873 + AZOBR_RS10260 0.11 -2.4 2,144,873 + AZOBR_RS10260 0.11 -0.3 2,144,873 + AZOBR_RS10260 0.11 -0.1 2,144,873 + AZOBR_RS10260 0.11 -2.1 2,144,874 - AZOBR_RS10260 0.11 -0.2 2,146,175 + AZOBR_RS10260 0.52 +0.2 2,146,175 + AZOBR_RS10260 0.52 +1.6 2,146,176 - AZOBR_RS10260 0.52 -0.8 2,146,176 - AZOBR_RS10260 0.52 +0.3 2,146,176 - AZOBR_RS10260 0.52 +0.5 2,146,176 - AZOBR_RS10260 0.52 +0.6 2,146,661 + AZOBR_RS10260 0.67 +0.5 2,146,661 + AZOBR_RS10260 0.67 +0.9 2,146,842 + AZOBR_RS10260 0.72 -0.4 2,147,237 + AZOBR_RS10260 0.84 +0.6 2,147,295 - AZOBR_RS10260 0.86 -1.1 2,147,295 - AZOBR_RS10260 0.86 +0.1 2,147,295 - AZOBR_RS10260 0.86 -2.7 2,147,444 + +0.8 2,147,444 + -3.2 2,147,444 + -0.1 2,147,445 - -0.0 2,147,445 - -0.1 2,147,811 - -0.2 2,147,995 + +1.2 2,148,102 + AZOBR_RS10265 0.10 -4.6 2,148,102 + AZOBR_RS10265 0.10 +0.3 2,148,103 - AZOBR_RS10265 0.10 +0.6 2,148,103 - AZOBR_RS10265 0.10 +0.2 2,148,103 - AZOBR_RS10265 0.10 -1.6 2,148,191 + +0.9 2,148,191 + AZOBR_RS10265 0.21 +0.3 2,148,191 + AZOBR_RS10265 0.21 +1.0 2,148,192 - AZOBR_RS10265 0.21 +0.3 2,148,195 - AZOBR_RS10265 0.21 +0.6 2,148,195 - AZOBR_RS10265 0.21 -1.8 2,148,218 + AZOBR_RS10265 0.24 +0.6 2,148,219 - AZOBR_RS10265 0.24 -2.8 2,148,413 + AZOBR_RS10265 0.47 +1.1 2,148,431 + AZOBR_RS10265 0.49 -2.8 2,148,534 - AZOBR_RS10265 0.62 +0.7 2,148,534 - AZOBR_RS10265 0.62 +0.8 2,148,639 - AZOBR_RS10265 0.74 -0.1 2,148,639 - AZOBR_RS10265 0.74 +1.6 2,148,644 + AZOBR_RS10265 0.75 +0.5 2,148,719 + AZOBR_RS10265 0.84 +1.7 2,148,719 + AZOBR_RS10265 0.84 +0.4 2,148,719 + AZOBR_RS10265 0.84 +0.9
Or see this region's nucleotide sequence