Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09505 and AZOBR_RS09510 are separated by 34 nucleotides AZOBR_RS09510 and AZOBR_RS09515 are separated by 123 nucleotides AZOBR_RS09515 and AZOBR_RS09520 are separated by 54 nucleotides
AZOBR_RS09505: AZOBR_RS09505 - DNA polymerase III epsilon subunit, at 1,989,476 to 1,990,789
_RS09505
AZOBR_RS09510: AZOBR_RS09510 - hypothetical protein, at 1,990,824 to 1,991,291
_RS09510
AZOBR_RS09515: AZOBR_RS09515 - heme ABC transporter ATP-binding protein, at 1,991,415 to 1,993,091
_RS09515
AZOBR_RS09520: AZOBR_RS09520 - hypothetical protein, at 1,993,146 to 1,994,627
_RS09520
Position (kb)
1991
1992
1993
1994 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1991.279 kb on - strand at 1991.279 kb on - strand at 1991.329 kb on - strand at 1991.329 kb on - strand at 1991.424 kb on + strand at 1991.430 kb on + strand at 1991.430 kb on + strand at 1991.430 kb on + strand at 1991.430 kb on + strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.436 kb on + strand at 1991.437 kb on - strand at 1991.437 kb on - strand at 1991.437 kb on - strand at 1991.464 kb on - strand at 1991.552 kb on + strand at 1991.595 kb on + strand, within AZOBR_RS09515 at 1991.595 kb on + strand, within AZOBR_RS09515 at 1992.042 kb on + strand, within AZOBR_RS09515 at 1992.078 kb on + strand, within AZOBR_RS09515 at 1992.078 kb on + strand, within AZOBR_RS09515 at 1992.150 kb on + strand, within AZOBR_RS09515 at 1992.151 kb on - strand, within AZOBR_RS09515 at 1992.151 kb on - strand, within AZOBR_RS09515 at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.211 kb on - strand at 1993.358 kb on - strand, within AZOBR_RS09520 at 1993.438 kb on + strand, within AZOBR_RS09520 at 1993.976 kb on - strand, within AZOBR_RS09520 at 1994.020 kb on + strand, within AZOBR_RS09520 at 1994.021 kb on - strand, within AZOBR_RS09520
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,991,279 - +0.2 1,991,279 - +0.1 1,991,329 - -0.2 1,991,329 - +1.6 1,991,424 + -2.3 1,991,430 + -1.0 1,991,430 + +0.3 1,991,430 + +0.4 1,991,430 + -1.7 1,991,431 - -0.4 1,991,431 - -0.0 1,991,431 - +0.5 1,991,431 - -1.7 1,991,431 - -0.2 1,991,436 + -0.7 1,991,437 - +0.4 1,991,437 - -1.1 1,991,437 - -0.9 1,991,464 - -1.7 1,991,552 + +0.5 1,991,595 + AZOBR_RS09515 0.11 -1.2 1,991,595 + AZOBR_RS09515 0.11 +0.0 1,992,042 + AZOBR_RS09515 0.37 -0.1 1,992,078 + AZOBR_RS09515 0.40 -0.3 1,992,078 + AZOBR_RS09515 0.40 -0.1 1,992,150 + AZOBR_RS09515 0.44 -0.6 1,992,151 - AZOBR_RS09515 0.44 +0.0 1,992,151 - AZOBR_RS09515 0.44 -0.1 1,993,068 + +0.8 1,993,068 + -3.6 1,993,068 + +0.3 1,993,068 + +0.2 1,993,211 - +0.2 1,993,358 - AZOBR_RS09520 0.14 -0.1 1,993,438 + AZOBR_RS09520 0.20 -2.2 1,993,976 - AZOBR_RS09520 0.56 -1.5 1,994,020 + AZOBR_RS09520 0.59 +0.1 1,994,021 - AZOBR_RS09520 0.59 -1.5
Or see this region's nucleotide sequence