Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05640 and AZOBR_RS05645 are separated by 62 nucleotides AZOBR_RS05645 and AZOBR_RS05650 are separated by 40 nucleotides AZOBR_RS05650 and AZOBR_RS05655 overlap by 4 nucleotides
AZOBR_RS05640: AZOBR_RS05640 - nitrogen fixation protein NifZ, at 1,197,317 to 1,197,589
_RS05640
AZOBR_RS05645: AZOBR_RS05645 - nifZ nitrogenase P-cluster assembly, at 1,197,652 to 1,197,948
_RS05645
AZOBR_RS05650: AZOBR_RS05650 - hypothetical protein, at 1,197,989 to 1,198,762
_RS05650
AZOBR_RS05655: AZOBR_RS05655 - hypothetical protein, at 1,198,759 to 1,199,307
_RS05655
Position (kb) 1197
1198 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1197.275 kb on + strand at 1197.275 kb on + strand at 1197.275 kb on + strand at 1197.275 kb on + strand at 1197.275 kb on + strand at 1197.276 kb on - strand at 1197.276 kb on - strand at 1197.417 kb on + strand, within AZOBR_RS05640 at 1197.417 kb on + strand, within AZOBR_RS05640 at 1197.417 kb on + strand, within AZOBR_RS05640 at 1197.745 kb on + strand, within AZOBR_RS05645 at 1197.753 kb on - strand, within AZOBR_RS05645 at 1197.836 kb on + strand, within AZOBR_RS05645 at 1197.837 kb on - strand, within AZOBR_RS05645 at 1197.837 kb on - strand, within AZOBR_RS05645 at 1198.348 kb on - strand, within AZOBR_RS05650 at 1198.566 kb on + strand, within AZOBR_RS05650 at 1198.566 kb on + strand, within AZOBR_RS05650 at 1198.566 kb on + strand, within AZOBR_RS05650 at 1198.567 kb on - strand, within AZOBR_RS05650 at 1198.567 kb on - strand, within AZOBR_RS05650 at 1198.635 kb on + strand, within AZOBR_RS05650
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,197,275 + +0.2 1,197,275 + +0.4 1,197,275 + +0.3 1,197,275 + -0.1 1,197,275 + -0.4 1,197,276 - -0.5 1,197,276 - -1.1 1,197,417 + AZOBR_RS05640 0.37 -0.0 1,197,417 + AZOBR_RS05640 0.37 -1.2 1,197,417 + AZOBR_RS05640 0.37 +0.1 1,197,745 + AZOBR_RS05645 0.31 +0.2 1,197,753 - AZOBR_RS05645 0.34 +0.6 1,197,836 + AZOBR_RS05645 0.62 +0.5 1,197,837 - AZOBR_RS05645 0.62 +1.0 1,197,837 - AZOBR_RS05645 0.62 -0.2 1,198,348 - AZOBR_RS05650 0.46 +2.0 1,198,566 + AZOBR_RS05650 0.75 -1.6 1,198,566 + AZOBR_RS05650 0.75 -0.7 1,198,566 + AZOBR_RS05650 0.75 +1.0 1,198,567 - AZOBR_RS05650 0.75 -0.6 1,198,567 - AZOBR_RS05650 0.75 -1.4 1,198,635 + AZOBR_RS05650 0.83 -2.0
Or see this region's nucleotide sequence