Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03380 and AZOBR_RS03385 are separated by 230 nucleotides AZOBR_RS03385 and AZOBR_RS03390 are separated by 150 nucleotides
AZOBR_RS03380: AZOBR_RS03380 - UDP-glucose 6-dehydrogenase, at 716,245 to 717,600
_RS03380
AZOBR_RS03385: AZOBR_RS03385 - polysaccharide biosynthesis protein, at 717,831 to 719,276
_RS03385
AZOBR_RS03390: AZOBR_RS03390 - protein tyrosine kinase, at 719,427 to 721,700
_RS03390
Position (kb) 717
718
719
720 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 716.957 kb on + strand, within AZOBR_RS03380 at 716.957 kb on + strand, within AZOBR_RS03380 at 716.958 kb on - strand, within AZOBR_RS03380 at 716.958 kb on - strand, within AZOBR_RS03380 at 716.958 kb on - strand, within AZOBR_RS03380 at 717.549 kb on - strand at 717.549 kb on - strand at 717.600 kb on + strand at 717.600 kb on + strand at 717.600 kb on + strand at 717.601 kb on - strand at 717.601 kb on - strand at 717.618 kb on + strand at 717.618 kb on + strand at 717.619 kb on - strand at 717.905 kb on - strand at 718.051 kb on + strand, within AZOBR_RS03385 at 718.051 kb on + strand, within AZOBR_RS03385 at 718.052 kb on - strand, within AZOBR_RS03385 at 718.213 kb on + strand, within AZOBR_RS03385 at 718.213 kb on + strand, within AZOBR_RS03385 at 718.213 kb on + strand, within AZOBR_RS03385 at 718.213 kb on + strand, within AZOBR_RS03385 at 718.214 kb on - strand, within AZOBR_RS03385 at 718.214 kb on - strand, within AZOBR_RS03385 at 718.214 kb on - strand, within AZOBR_RS03385 at 718.415 kb on - strand, within AZOBR_RS03385 at 718.876 kb on + strand, within AZOBR_RS03385 at 718.982 kb on - strand, within AZOBR_RS03385 at 718.982 kb on - strand, within AZOBR_RS03385 at 719.083 kb on + strand, within AZOBR_RS03385 at 719.438 kb on - strand at 719.438 kb on - strand at 719.441 kb on - strand at 719.692 kb on + strand, within AZOBR_RS03390 at 719.693 kb on - strand, within AZOBR_RS03390 at 720.109 kb on + strand, within AZOBR_RS03390 at 720.109 kb on + strand, within AZOBR_RS03390 at 720.110 kb on - strand, within AZOBR_RS03390
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 716,957 + AZOBR_RS03380 0.53 +0.3 716,957 + AZOBR_RS03380 0.53 -0.2 716,958 - AZOBR_RS03380 0.53 -0.4 716,958 - AZOBR_RS03380 0.53 +1.1 716,958 - AZOBR_RS03380 0.53 -0.4 717,549 - +1.1 717,549 - +1.3 717,600 + +3.7 717,600 + -0.6 717,600 + +1.7 717,601 - -0.5 717,601 - +1.2 717,618 + +0.1 717,618 + -0.0 717,619 - +0.3 717,905 - -1.8 718,051 + AZOBR_RS03385 0.15 +2.2 718,051 + AZOBR_RS03385 0.15 -0.4 718,052 - AZOBR_RS03385 0.15 +0.3 718,213 + AZOBR_RS03385 0.26 -1.0 718,213 + AZOBR_RS03385 0.26 +0.8 718,213 + AZOBR_RS03385 0.26 +0.1 718,213 + AZOBR_RS03385 0.26 -0.8 718,214 - AZOBR_RS03385 0.26 -0.6 718,214 - AZOBR_RS03385 0.26 -0.3 718,214 - AZOBR_RS03385 0.26 +0.3 718,415 - AZOBR_RS03385 0.40 -1.0 718,876 + AZOBR_RS03385 0.72 -1.4 718,982 - AZOBR_RS03385 0.80 -0.5 718,982 - AZOBR_RS03385 0.80 -2.2 719,083 + AZOBR_RS03385 0.87 -0.8 719,438 - -0.2 719,438 - -0.5 719,441 - +1.7 719,692 + AZOBR_RS03390 0.12 -0.8 719,693 - AZOBR_RS03390 0.12 -0.1 720,109 + AZOBR_RS03390 0.30 +0.5 720,109 + AZOBR_RS03390 0.30 +0.3 720,110 - AZOBR_RS03390 0.30 +1.3
Or see this region's nucleotide sequence