Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16775

Experiment: soil EcoFAB sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil EcoFAB sample 2; outgrowth in LB
115,420	+		ABZR87_RS16770	0.70	+0.5
115,614	-		ABZR87_RS16770	0.76	+0.7
115,799	+		ABZR87_RS16770	0.83	-0.8
115,799	+		ABZR87_RS16770	0.83	+0.1
115,800	-		ABZR87_RS16770	0.83	-0.7
115,800	-		ABZR87_RS16770	0.83	-0.2
115,815	+		ABZR87_RS16770	0.83	+0.5
115,815	+		ABZR87_RS16770	0.83	+0.3
115,816	-		ABZR87_RS16770	0.83	-1.4
115,816	-		ABZR87_RS16770	0.83	+0.2
116,096	+				-0.2
116,097	+				+0.2
116,097	+				-0.7
116,097	+				+0.9
116,098	-				-2.4
116,098	-				-2.0
116,098	-				+1.4
116,162	+				-0.2
116,163	-				-0.6
116,205	+				+0.8
116,205	+				+1.3
116,205	+				+0.2
116,206	-				-2.0
116,206	-				-0.5
116,206	-				-0.2
116,206	-				-2.5
116,206	-				+0.3
116,206	-				+0.2
116,206	-				-1.5
116,268	+				-0.2
116,268	+				+0.4
116,269	-				-2.5
116,269	-				+1.0
116,323	+				-1.4
116,337	+				-0.2
116,337	+				+0.0
116,337	+				-1.7
116,337	+				-0.7
116,338	-				+0.4
116,338	-				+1.0
116,338	-				+0.4
116,338	-				+0.1
116,339	+				+1.2
116,340	-				-0.5
116,438	+				-0.8
116,438	+				+0.7
116,438	+				-1.6
116,438	+				-0.6
116,439	-				-1.9
116,489	+				-2.7
116,489	+				+0.0
116,489	+				+2.2
116,490	-				-0.3
116,505	-				+0.7
116,798	+		ABZR87_RS16775	0.32	+0.7
116,798	+		ABZR87_RS16775	0.32	-1.8
116,798	+		ABZR87_RS16775	0.32	-2.5
116,798	+		ABZR87_RS16775	0.32	-3.2
116,798	+		ABZR87_RS16775	0.32	-1.7
116,798	+		ABZR87_RS16775	0.32	-0.5
116,799	-		ABZR87_RS16775	0.32	+0.3
116,799	-		ABZR87_RS16775	0.32	-1.5
116,799	-		ABZR87_RS16775	0.32	-1.9
116,799	-		ABZR87_RS16775	0.32	-1.5
116,799	-		ABZR87_RS16775	0.32	-1.6
116,799	-		ABZR87_RS16775	0.32	+0.1
116,799	-		ABZR87_RS16775	0.32	+0.2
116,799	-		ABZR87_RS16775	0.32	-1.0
116,799	-		ABZR87_RS16775	0.32	-0.1
116,799	-		ABZR87_RS16775	0.32	+0.4
116,893	+		ABZR87_RS16775	0.40	-1.4
116,893	+		ABZR87_RS16775	0.40	-2.0
116,893	+		ABZR87_RS16775	0.40	-0.3
116,980	+		ABZR87_RS16775	0.46	-0.3
116,980	+		ABZR87_RS16775	0.46	-0.8
116,980	+		ABZR87_RS16775	0.46	-0.6
116,980	+		ABZR87_RS16775	0.46	+1.6
116,981	-		ABZR87_RS16775	0.46	-0.1
117,020	+		ABZR87_RS16775	0.49	-0.1
117,020	+		ABZR87_RS16775	0.49	+0.4
117,020	+		ABZR87_RS16775	0.49	+0.5
117,020	+		ABZR87_RS16775	0.49	-0.9
117,020	+		ABZR87_RS16775	0.49	+1.3
117,020	+		ABZR87_RS16775	0.49	-0.9
117,020	+		ABZR87_RS16775	0.49	-3.6
117,020	+		ABZR87_RS16775	0.49	+0.1
117,021	-		ABZR87_RS16775	0.49	+0.8
117,021	-		ABZR87_RS16775	0.49	-0.2
117,021	-		ABZR87_RS16775	0.49	+1.6
117,021	-		ABZR87_RS16775	0.49	-2.1
117,021	-		ABZR87_RS16775	0.49	-0.7
117,021	-		ABZR87_RS16775	0.49	-1.3
117,026	+		ABZR87_RS16775	0.50	-1.6
117,026	+		ABZR87_RS16775	0.50	+0.2
117,026	+		ABZR87_RS16775	0.50	-2.9
117,027	-		ABZR87_RS16775	0.50	+0.8
117,027	-		ABZR87_RS16775	0.50	+1.0
117,144	+		ABZR87_RS16775	0.59	+0.6
117,144	+		ABZR87_RS16775	0.59	-0.7
117,145	-		ABZR87_RS16775	0.59	-0.7
117,145	-		ABZR87_RS16775	0.59	+1.1
117,145	-		ABZR87_RS16775	0.59	-0.7
117,145	-		ABZR87_RS16775	0.59	+0.1
117,323	+		ABZR87_RS16775	0.72	-0.1
117,323	+		ABZR87_RS16775	0.72	-2.2
117,323	+		ABZR87_RS16775	0.72	+1.0
117,323	+		ABZR87_RS16775	0.72	-0.4
117,323	+		ABZR87_RS16775	0.72	+0.7
117,323	+		ABZR87_RS16775	0.72	+0.5
117,324	-		ABZR87_RS16775	0.72	+1.6
117,324	-		ABZR87_RS16775	0.72	-3.4
117,324	-		ABZR87_RS16775	0.72	-1.2
117,324	-		ABZR87_RS16775	0.72	-0.0
117,324	-		ABZR87_RS16775	0.72	-1.2
117,359	+		ABZR87_RS16775	0.75	-2.3
117,359	+		ABZR87_RS16775	0.75	+0.6
117,359	+		ABZR87_RS16775	0.75	-1.3
117,360	-		ABZR87_RS16775	0.75	+0.5
117,360	-		ABZR87_RS16775	0.75	+0.6
117,360	-		ABZR87_RS16775	0.75	+1.4
117,360	-		ABZR87_RS16775	0.75	-0.6
117,399	+		ABZR87_RS16775	0.78	-1.5
117,488	+		ABZR87_RS16775	0.85	+0.4
117,489	-		ABZR87_RS16775	0.85	-1.5
117,489	-		ABZR87_RS16775	0.85	-2.0
117,489	-		ABZR87_RS16775	0.85	-0.4
117,521	+		ABZR87_RS16775	0.87	+1.4
117,629	+				-0.3
117,629	+				+0.4
117,630	-				+0.3
117,630	-				+0.1
117,779	-				+0.1
117,841	+				+0.8
117,841	+				+1.2
117,842	-				-0.7
117,842	-				-0.1
117,844	+				-0.6
117,845	-				-1.2
117,845	-				+0.3
117,868	-				+0.0
117,955	+				+0.7
117,955	+				-0.4
117,955	+				-0.6
117,955	+				+1.8
117,956	-				-0.2
117,956	-				-3.1
117,956	-				+2.5
117,975	-				+0.3
117,998	+				+0.8
118,047	-				-0.1
118,047	-				-1.2
118,122	+				+1.0
118,137	+				+1.9
118,137	+				+0.8
118,137	+				+0.6
118,137	+				+1.3
118,138	-				-2.0
118,146	+				-2.3
118,147	-				+0.4
118,147	-				+0.1
118,151	+				+0.9
118,151	+				+0.9
118,151	+				-1.5
118,151	+				+0.1
118,151	+				-2.7
118,152	-				-2.2
118,152	-				+2.0
118,155	+				+0.8
118,155	+				+1.7
118,155	+				-0.2
118,155	+				-0.4
118,155	+				+0.8
118,155	+				+1.0
118,155	+				+1.8
118,155	+				-0.4
118,156	-				-0.0
118,156	-				-0.0
118,156	-				-0.1
118,156	-				-0.3
118,156	-				-1.5
118,156	-				-0.4
118,156	-				-0.6
118,156	-				-1.7
118,156	-				+1.2
118,156	-				+0.7
118,156	-				+0.0
118,156	-				-1.0
118,156	-				-0.9
118,156	-				-0.1
118,156	-				+0.6
118,156	-				-2.1
118,161	+				+0.8
118,161	+				-0.2
118,161	+				+0.6
118,161	+				+0.9
118,162	-				-2.7
118,162	-				-0.0
118,162	-				-0.6
118,162	-				+0.2
118,171	+				+1.3
118,171	+				+1.4
118,171	+				+0.8
118,171	+				+0.4
118,171	+				-2.9
118,171	+				+0.6
118,171	+				+1.1
118,172	-				-0.7
118,172	-				-1.4
118,200	+				+1.2
118,200	+				+0.4
118,200	+				-3.0
118,200	+				+0.5
118,200	+				-1.5
118,201	-				+0.7
118,201	-				-0.4
118,201	-				+0.7
118,201	-				-0.2
118,201	-				-0.8
118,201	-				-0.4
118,357	+				+2.1
118,358	-				+1.3
118,358	-				+0.2
118,583	+				-1.3
118,661	-				-1.9
118,661	-				+0.4