Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07670

Experiment: soil EcoFAB sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil EcoFAB sample 2; outgrowth in LB
1,624,504	-		ABZR87_RS07665	0.49	-3.5
1,624,504	-		ABZR87_RS07665	0.49	-3.1
1,624,540	-		ABZR87_RS07665	0.51	-1.3
1,624,564	-		ABZR87_RS07665	0.53	-1.1
1,624,564	-		ABZR87_RS07665	0.53	-1.9
1,624,564	-		ABZR87_RS07665	0.53	-2.9
1,624,804	-		ABZR87_RS07665	0.70	-2.6
1,625,027	-		ABZR87_RS07665	0.86	+2.4
1,625,027	-		ABZR87_RS07665	0.86	-0.9
1,625,041	-		ABZR87_RS07665	0.87	-0.4
1,625,041	-		ABZR87_RS07665	0.87	-1.7
1,625,041	-		ABZR87_RS07665	0.87	-2.8
1,625,041	-		ABZR87_RS07665	0.87	+0.0
1,625,041	-		ABZR87_RS07665	0.87	-3.5
1,625,041	-		ABZR87_RS07665	0.87	-3.5
1,625,044	-		ABZR87_RS07665	0.87	-2.0
1,625,044	-		ABZR87_RS07665	0.87	-2.6
1,625,044	-		ABZR87_RS07665	0.87	-2.6
1,625,044	-		ABZR87_RS07665	0.87	-2.1
1,625,044	-		ABZR87_RS07665	0.87	-2.6
1,625,050	-		ABZR87_RS07665	0.88	-2.8
1,625,050	-		ABZR87_RS07665	0.88	-1.4
1,625,050	-		ABZR87_RS07665	0.88	-2.1
1,625,050	-		ABZR87_RS07665	0.88	+1.2
1,625,050	-		ABZR87_RS07665	0.88	-1.4
1,625,050	-		ABZR87_RS07665	0.88	-2.0
1,625,050	-		ABZR87_RS07665	0.88	-1.5
1,625,050	-		ABZR87_RS07665	0.88	-2.9
1,625,050	-		ABZR87_RS07665	0.88	+1.2
1,625,050	-		ABZR87_RS07665	0.88	-1.7
1,625,050	-		ABZR87_RS07665	0.88	-2.7
1,625,071	-		ABZR87_RS07665	0.89	-2.0
1,625,185	-				-2.4
1,625,185	-				-2.1
1,625,185	-				-2.4
1,625,256	+				+0.9
1,625,336	+				+1.4
1,625,364	+				+1.0
1,625,364	+				+1.4
1,625,364	+				+1.0
1,625,365	-				-0.9
1,625,365	-				-1.2
1,625,459	+				+0.6
1,625,459	+				-0.8
1,625,459	+				+2.3
1,625,459	+				-0.7
1,625,459	+				+0.5
1,625,460	-				+0.7
1,625,460	-				-0.7
1,625,460	-				-0.3
1,625,460	-				+0.4
1,625,510	+				-2.7
1,625,510	+				-1.8
1,625,511	-				+0.9
1,625,511	-				-1.6
1,625,512	+				-2.9
1,625,513	-				-1.6
1,625,513	-				+0.2
1,625,525	-				-1.0
1,625,763	+		ABZR87_RS07670	0.16	+0.5
1,625,810	+		ABZR87_RS07670	0.18	-1.1
1,625,811	-		ABZR87_RS07670	0.18	-0.1
1,625,811	-		ABZR87_RS07670	0.18	-0.5
1,625,811	-		ABZR87_RS07670	0.18	-0.3
1,625,811	-		ABZR87_RS07670	0.18	-1.7
1,625,852	+		ABZR87_RS07670	0.20	-0.4
1,625,852	+		ABZR87_RS07670	0.20	-0.0
1,625,853	-		ABZR87_RS07670	0.20	-1.2
1,625,853	-		ABZR87_RS07670	0.20	-1.9
1,626,011	+		ABZR87_RS07670	0.28	+0.8
1,626,011	+		ABZR87_RS07670	0.28	-0.1
1,626,011	+		ABZR87_RS07670	0.28	-0.2
1,626,011	+		ABZR87_RS07670	0.28	+0.6
1,626,011	+		ABZR87_RS07670	0.28	+0.8
1,626,011	+		ABZR87_RS07670	0.28	+0.4
1,626,012	-		ABZR87_RS07670	0.28	+1.3
1,626,012	-		ABZR87_RS07670	0.28	-0.6
1,626,131	-		ABZR87_RS07670	0.33	+1.2
1,626,225	-		ABZR87_RS07670	0.38	-1.0
1,626,225	-		ABZR87_RS07670	0.38	-0.8
1,626,377	+		ABZR87_RS07670	0.45	+0.3
1,626,378	-		ABZR87_RS07670	0.45	-0.1
1,626,378	-		ABZR87_RS07670	0.45	-2.2
1,626,378	-		ABZR87_RS07670	0.45	+2.2
1,626,378	-		ABZR87_RS07670	0.45	-0.5
1,626,378	-		ABZR87_RS07670	0.45	+0.2
1,626,494	+		ABZR87_RS07670	0.51	+1.6
1,626,494	+		ABZR87_RS07670	0.51	-2.3
1,626,495	-		ABZR87_RS07670	0.51	+0.7
1,626,495	-		ABZR87_RS07670	0.51	+1.1
1,626,614	+		ABZR87_RS07670	0.57	+1.3
1,626,671	+		ABZR87_RS07670	0.60	-0.4
1,626,671	+		ABZR87_RS07670	0.60	-0.3
1,626,701	+		ABZR87_RS07670	0.61	-0.1
1,626,702	-		ABZR87_RS07670	0.61	-0.9
1,626,705	+		ABZR87_RS07670	0.61	-0.3
1,626,735	+		ABZR87_RS07670	0.63	-0.0
1,626,735	+		ABZR87_RS07670	0.63	+0.0
1,626,735	+		ABZR87_RS07670	0.63	+1.1
1,626,735	+		ABZR87_RS07670	0.63	-1.4
1,626,735	+		ABZR87_RS07670	0.63	-0.8
1,626,735	+		ABZR87_RS07670	0.63	+0.5
1,626,736	-		ABZR87_RS07670	0.63	-0.5
1,626,736	-		ABZR87_RS07670	0.63	+0.2
1,626,736	-		ABZR87_RS07670	0.63	+0.0
1,626,736	-		ABZR87_RS07670	0.63	-2.0
1,626,736	-		ABZR87_RS07670	0.63	+0.4
1,626,736	-		ABZR87_RS07670	0.63	+0.2
1,626,736	-		ABZR87_RS07670	0.63	-1.2
1,626,736	-		ABZR87_RS07670	0.63	-0.2
1,626,736	-		ABZR87_RS07670	0.63	-1.0
1,626,803	+		ABZR87_RS07670	0.66	+0.2
1,626,804	-		ABZR87_RS07670	0.66	-0.3
1,626,804	-		ABZR87_RS07670	0.66	+0.9
1,626,804	-		ABZR87_RS07670	0.66	+0.2
1,627,245	-		ABZR87_RS07670	0.88	-0.8
1,627,448	+				+1.1
1,627,449	-				+0.4
1,627,449	-				+0.2
1,627,499	+				-2.0
1,627,500	-				-0.0
1,627,592	+		ABZR87_RS07675	0.12	+0.6
1,627,621	+		ABZR87_RS07675	0.17	-2.6
1,627,621	+		ABZR87_RS07675	0.17	-1.2
1,627,621	+		ABZR87_RS07675	0.17	-3.8
1,627,621	+		ABZR87_RS07675	0.17	-1.0
1,627,622	-		ABZR87_RS07675	0.17	-1.3
1,627,681	+		ABZR87_RS07675	0.25	-2.3
1,627,682	-		ABZR87_RS07675	0.25	-3.0
1,627,682	-		ABZR87_RS07675	0.25	-1.8
1,627,771	+		ABZR87_RS07675	0.38	-0.7
1,627,771	+		ABZR87_RS07675	0.38	+0.1
1,627,772	-		ABZR87_RS07675	0.38	-3.5
1,627,856	-		ABZR87_RS07675	0.51	-3.9
1,627,856	-		ABZR87_RS07675	0.51	-2.1
1,627,861	+		ABZR87_RS07675	0.51	+0.2
1,627,862	-		ABZR87_RS07675	0.51	-0.9
1,627,862	-		ABZR87_RS07675	0.51	-2.2
1,627,896	+		ABZR87_RS07675	0.56	-1.8
1,627,896	+		ABZR87_RS07675	0.56	-1.8
1,627,896	+		ABZR87_RS07675	0.56	-2.4
1,627,896	+		ABZR87_RS07675	0.56	-0.5
1,627,897	-		ABZR87_RS07675	0.56	+0.6
1,627,897	-		ABZR87_RS07675	0.56	-2.7
1,627,897	-		ABZR87_RS07675	0.56	-0.7
1,627,897	-		ABZR87_RS07675	0.56	-0.4
1,627,981	+		ABZR87_RS07675	0.69	-3.1
1,627,981	+		ABZR87_RS07675	0.69	-0.3
1,627,982	-		ABZR87_RS07675	0.69	-1.1
1,628,416	-		ABZR87_RS07680	0.61	+1.8
1,628,416	-		ABZR87_RS07680	0.61	+1.9
1,628,416	-		ABZR87_RS07680	0.61	-0.1
1,628,416	-		ABZR87_RS07680	0.61	-2.1
1,628,416	-		ABZR87_RS07680	0.61	-1.5
1,628,490	+		ABZR87_RS07680	0.84	-0.5
1,628,490	+		ABZR87_RS07680	0.84	-1.8
1,628,491	-		ABZR87_RS07680	0.84	+1.3
1,628,491	-		ABZR87_RS07680	0.84	-1.8