Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3373 and Dshi_3374 are separated by 136 nucleotides Dshi_3374 and Dshi_3375 are separated by 6 nucleotides
Dshi_3373: Dshi_3373 - chromosomal replication initiator protein DnaA (RefSeq), at 3,544,704 to 3,546,086
_3373
Dshi_3374: Dshi_3374 - DNA polymerase III, beta subunit (RefSeq), at 3,546,223 to 3,547,341
_3374
Dshi_3375: Dshi_3375 - SMC domain protein (RefSeq), at 3,547,348 to 3,548,433
_3375
Position (kb)
3546
3547
3548 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3546.112 kb on + strand at 3546.129 kb on - strand at 3547.335 kb on + strand at 3547.371 kb on - strand at 3547.397 kb on + strand at 3547.410 kb on - strand at 3547.440 kb on + strand at 3547.542 kb on + strand, within Dshi_3375 at 3547.706 kb on - strand, within Dshi_3375 at 3547.714 kb on + strand, within Dshi_3375 at 3547.714 kb on + strand, within Dshi_3375 at 3547.722 kb on - strand, within Dshi_3375 at 3547.722 kb on - strand, within Dshi_3375 at 3547.741 kb on + strand, within Dshi_3375 at 3547.759 kb on + strand, within Dshi_3375 at 3547.963 kb on + strand, within Dshi_3375 at 3547.963 kb on + strand, within Dshi_3375 at 3547.963 kb on + strand, within Dshi_3375 at 3547.971 kb on + strand, within Dshi_3375 at 3547.971 kb on - strand, within Dshi_3375 at 3547.971 kb on - strand, within Dshi_3375 at 3548.037 kb on - strand, within Dshi_3375 at 3548.099 kb on + strand, within Dshi_3375 at 3548.099 kb on + strand, within Dshi_3375 at 3548.107 kb on - strand, within Dshi_3375 at 3548.107 kb on - strand, within Dshi_3375 at 3548.154 kb on + strand, within Dshi_3375 at 3548.154 kb on + strand, within Dshi_3375 at 3548.162 kb on - strand, within Dshi_3375 at 3548.162 kb on - strand, within Dshi_3375 at 3548.162 kb on - strand, within Dshi_3375 at 3548.169 kb on + strand, within Dshi_3375 at 3548.172 kb on - strand, within Dshi_3375 at 3548.207 kb on + strand, within Dshi_3375 at 3548.261 kb on + strand, within Dshi_3375 at 3548.341 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 3,546,112 + +1.2 3,546,129 - -0.3 3,547,335 + -4.9 3,547,371 - -2.4 3,547,397 + -5.4 3,547,410 - -1.1 3,547,440 + -2.4 3,547,542 + Dshi_3375 0.18 -0.1 3,547,706 - Dshi_3375 0.33 -4.6 3,547,714 + Dshi_3375 0.34 -3.9 3,547,714 + Dshi_3375 0.34 -3.4 3,547,722 - Dshi_3375 0.34 -2.1 3,547,722 - Dshi_3375 0.34 -2.7 3,547,741 + Dshi_3375 0.36 -2.4 3,547,759 + Dshi_3375 0.38 -2.9 3,547,963 + Dshi_3375 0.57 -2.4 3,547,963 + Dshi_3375 0.57 -2.7 3,547,963 + Dshi_3375 0.57 -1.7 3,547,971 + Dshi_3375 0.57 -4.1 3,547,971 - Dshi_3375 0.57 -2.9 3,547,971 - Dshi_3375 0.57 -2.9 3,548,037 - Dshi_3375 0.63 -1.9 3,548,099 + Dshi_3375 0.69 -4.0 3,548,099 + Dshi_3375 0.69 -3.1 3,548,107 - Dshi_3375 0.70 -4.0 3,548,107 - Dshi_3375 0.70 -4.3 3,548,154 + Dshi_3375 0.74 -1.7 3,548,154 + Dshi_3375 0.74 -4.4 3,548,162 - Dshi_3375 0.75 -2.4 3,548,162 - Dshi_3375 0.75 -4.2 3,548,162 - Dshi_3375 0.75 -2.1 3,548,169 + Dshi_3375 0.76 -2.9 3,548,172 - Dshi_3375 0.76 -2.1 3,548,207 + Dshi_3375 0.79 -1.7 3,548,261 + Dshi_3375 0.84 -5.5 3,548,341 + -2.4
Or see this region's nucleotide sequence