Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2853 and Dshi_2854 are separated by 122 nucleotides Dshi_2854 and Dshi_2855 are separated by 208 nucleotides
Dshi_2853: Dshi_2853 - crotonyl-CoA reductase (RefSeq), at 3,010,523 to 3,011,815
_2853
Dshi_2854: Dshi_2854 - phospholipid/glycerol acyltransferase (RefSeq), at 3,011,938 to 3,013,380
_2854
Dshi_2855: Dshi_2855 - methylmalonyl-CoA mutase, large subunit (RefSeq), at 3,013,589 to 3,015,562
_2855
Position (kb)
3011
3012
3013
3014 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3010.968 kb on - strand, within Dshi_2853 at 3010.977 kb on + strand, within Dshi_2853 at 3011.026 kb on - strand, within Dshi_2853 at 3011.071 kb on + strand, within Dshi_2853 at 3011.163 kb on + strand, within Dshi_2853 at 3011.247 kb on - strand, within Dshi_2853 at 3011.323 kb on + strand, within Dshi_2853 at 3011.460 kb on - strand, within Dshi_2853 at 3011.481 kb on + strand, within Dshi_2853 at 3011.625 kb on - strand, within Dshi_2853 at 3011.625 kb on - strand, within Dshi_2853 at 3011.672 kb on - strand, within Dshi_2853 at 3011.751 kb on + strand at 3011.786 kb on + strand at 3011.793 kb on - strand at 3012.015 kb on - strand at 3012.481 kb on + strand, within Dshi_2854 at 3012.617 kb on + strand, within Dshi_2854 at 3012.651 kb on + strand, within Dshi_2854 at 3012.664 kb on + strand, within Dshi_2854 at 3012.706 kb on - strand, within Dshi_2854 at 3012.751 kb on - strand, within Dshi_2854 at 3012.805 kb on - strand, within Dshi_2854 at 3012.817 kb on + strand, within Dshi_2854 at 3012.955 kb on - strand, within Dshi_2854 at 3012.965 kb on - strand, within Dshi_2854 at 3012.996 kb on + strand, within Dshi_2854 at 3013.067 kb on + strand, within Dshi_2854 at 3013.073 kb on + strand, within Dshi_2854 at 3013.075 kb on - strand, within Dshi_2854 at 3013.112 kb on + strand, within Dshi_2854 at 3013.238 kb on + strand at 3013.368 kb on + strand at 3013.390 kb on + strand at 3013.638 kb on + strand at 3013.750 kb on + strand at 3013.966 kb on - strand, within Dshi_2855 at 3013.997 kb on + strand, within Dshi_2855 at 3013.998 kb on + strand, within Dshi_2855 at 3013.998 kb on + strand, within Dshi_2855 at 3014.005 kb on - strand, within Dshi_2855 at 3014.005 kb on - strand, within Dshi_2855 at 3014.142 kb on - strand, within Dshi_2855 at 3014.316 kb on - strand, within Dshi_2855
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 3,010,968 - Dshi_2853 0.34 -0.1 3,010,977 + Dshi_2853 0.35 -0.7 3,011,026 - Dshi_2853 0.39 -2.8 3,011,071 + Dshi_2853 0.42 -0.7 3,011,163 + Dshi_2853 0.49 +1.0 3,011,247 - Dshi_2853 0.56 +0.5 3,011,323 + Dshi_2853 0.62 +0.0 3,011,460 - Dshi_2853 0.72 -0.3 3,011,481 + Dshi_2853 0.74 -1.2 3,011,625 - Dshi_2853 0.85 -0.8 3,011,625 - Dshi_2853 0.85 +0.0 3,011,672 - Dshi_2853 0.89 +0.5 3,011,751 + +2.4 3,011,786 + +1.0 3,011,793 - +0.3 3,012,015 - -1.2 3,012,481 + Dshi_2854 0.38 -0.1 3,012,617 + Dshi_2854 0.47 +0.6 3,012,651 + Dshi_2854 0.49 +0.0 3,012,664 + Dshi_2854 0.50 -1.0 3,012,706 - Dshi_2854 0.53 -0.1 3,012,751 - Dshi_2854 0.56 -1.3 3,012,805 - Dshi_2854 0.60 -0.3 3,012,817 + Dshi_2854 0.61 -0.1 3,012,955 - Dshi_2854 0.70 -0.6 3,012,965 - Dshi_2854 0.71 +0.5 3,012,996 + Dshi_2854 0.73 -0.4 3,013,067 + Dshi_2854 0.78 +0.6 3,013,073 + Dshi_2854 0.79 -0.7 3,013,075 - Dshi_2854 0.79 -1.1 3,013,112 + Dshi_2854 0.81 -0.4 3,013,238 + +0.2 3,013,368 + -0.3 3,013,390 + -0.5 3,013,638 + +0.9 3,013,750 + +0.6 3,013,966 - Dshi_2855 0.19 +0.4 3,013,997 + Dshi_2855 0.21 +0.9 3,013,998 + Dshi_2855 0.21 +1.2 3,013,998 + Dshi_2855 0.21 +0.1 3,014,005 - Dshi_2855 0.21 +0.7 3,014,005 - Dshi_2855 0.21 +0.1 3,014,142 - Dshi_2855 0.28 +0.5 3,014,316 - Dshi_2855 0.37 -0.2
Or see this region's nucleotide sequence