Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2700 and Dshi_2701 overlap by 1 nucleotides Dshi_2701 and Dshi_2702 overlap by 4 nucleotides Dshi_2702 and Dshi_2703 are separated by 73 nucleotides Dshi_2703 and Dshi_2704 are separated by 160 nucleotides
Dshi_2700: Dshi_2700 - haloacid dehalogenase, type II (RefSeq), at 2,860,992 to 2,861,681
_2700
Dshi_2701: Dshi_2701 - alpha/beta hydrolase fold (RefSeq), at 2,861,681 to 2,862,505
_2701
Dshi_2702: Dshi_2702 - Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq), at 2,862,502 to 2,863,494
_2702
Dshi_2703: Dshi_2703 - hypothetical protein (RefSeq), at 2,863,568 to 2,863,975
_2703
Dshi_2704: Dshi_2704 - porphobilinogen deaminase (RefSeq), at 2,864,136 to 2,865,179
_2704
Position (kb)
2862
2863
2864 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2861.590 kb on + strand, within Dshi_2700 at 2861.814 kb on + strand, within Dshi_2701 at 2861.836 kb on + strand, within Dshi_2701 at 2861.883 kb on - strand, within Dshi_2701 at 2861.883 kb on - strand, within Dshi_2701 at 2861.958 kb on - strand, within Dshi_2701 at 2862.052 kb on + strand, within Dshi_2701 at 2862.053 kb on - strand, within Dshi_2701 at 2862.121 kb on + strand, within Dshi_2701 at 2862.265 kb on + strand, within Dshi_2701 at 2862.289 kb on + strand, within Dshi_2701 at 2862.576 kb on + strand at 2862.580 kb on - strand at 2862.632 kb on - strand, within Dshi_2702 at 2862.704 kb on - strand, within Dshi_2702 at 2862.749 kb on + strand, within Dshi_2702 at 2862.875 kb on - strand, within Dshi_2702 at 2862.934 kb on - strand, within Dshi_2702 at 2863.044 kb on - strand, within Dshi_2702 at 2863.601 kb on + strand at 2863.611 kb on - strand, within Dshi_2703 at 2863.746 kb on - strand, within Dshi_2703 at 2863.910 kb on + strand, within Dshi_2703 at 2863.968 kb on - strand at 2863.998 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,861,590 + Dshi_2700 0.87 +0.3 2,861,814 + Dshi_2701 0.16 -0.7 2,861,836 + Dshi_2701 0.19 -0.9 2,861,883 - Dshi_2701 0.24 +0.3 2,861,883 - Dshi_2701 0.24 +0.1 2,861,958 - Dshi_2701 0.34 -0.4 2,862,052 + Dshi_2701 0.45 -0.2 2,862,053 - Dshi_2701 0.45 -2.1 2,862,121 + Dshi_2701 0.53 -1.3 2,862,265 + Dshi_2701 0.71 -1.7 2,862,289 + Dshi_2701 0.74 +0.1 2,862,576 + -0.5 2,862,580 - -0.3 2,862,632 - Dshi_2702 0.13 -0.2 2,862,704 - Dshi_2702 0.20 +0.4 2,862,749 + Dshi_2702 0.25 +0.5 2,862,875 - Dshi_2702 0.38 -0.7 2,862,934 - Dshi_2702 0.44 +1.2 2,863,044 - Dshi_2702 0.55 +1.1 2,863,601 + +1.8 2,863,611 - Dshi_2703 0.11 -0.5 2,863,746 - Dshi_2703 0.44 +1.1 2,863,910 + Dshi_2703 0.84 +0.1 2,863,968 - -0.2 2,863,998 + +0.1
Or see this region's nucleotide sequence