Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2429 and Dshi_2430 overlap by 4 nucleotides Dshi_2430 and Dshi_2431 overlap by 25 nucleotides Dshi_2431 and Dshi_2432 overlap by 4 nucleotides
Dshi_2429: Dshi_2429 - Rhamnulokinase RhaK in alpha-proteobacteria (EC 2.7.1.5) (from data) , at 2,570,227 to 2,571,612
_2429
Dshi_2430: Dshi_2430 - L-rhamnose 1-epimerase (RefSeq), at 2,571,609 to 2,571,947
_2430
Dshi_2431: Dshi_2431 - Monosaccharide-transporting ATPase (RefSeq), at 2,571,923 to 2,572,909
_2431
Dshi_2432: Dshi_2432 - Monosaccharide-transporting ATPase (RefSeq), at 2,572,906 to 2,573,889
_2432
Position (kb)
2571
2572 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2570.673 kb on - strand, within Dshi_2429 at 2570.712 kb on + strand, within Dshi_2429 at 2570.729 kb on + strand, within Dshi_2429 at 2570.737 kb on - strand, within Dshi_2429 at 2570.747 kb on + strand, within Dshi_2429 at 2570.771 kb on + strand, within Dshi_2429 at 2570.779 kb on - strand, within Dshi_2429 at 2570.813 kb on - strand, within Dshi_2429 at 2570.956 kb on - strand, within Dshi_2429 at 2570.975 kb on - strand, within Dshi_2429 at 2571.132 kb on + strand, within Dshi_2429 at 2571.132 kb on + strand, within Dshi_2429 at 2571.197 kb on + strand, within Dshi_2429 at 2571.214 kb on - strand, within Dshi_2429 at 2571.227 kb on + strand, within Dshi_2429 at 2571.287 kb on + strand, within Dshi_2429 at 2571.287 kb on + strand, within Dshi_2429 at 2571.302 kb on + strand, within Dshi_2429 at 2571.495 kb on - strand at 2571.638 kb on + strand at 2571.665 kb on + strand, within Dshi_2430 at 2571.665 kb on - strand, within Dshi_2430 at 2571.726 kb on + strand, within Dshi_2430 at 2571.875 kb on - strand, within Dshi_2430 at 2572.168 kb on + strand, within Dshi_2431 at 2572.181 kb on - strand, within Dshi_2431 at 2572.301 kb on + strand, within Dshi_2431 at 2572.401 kb on + strand, within Dshi_2431 at 2572.409 kb on - strand, within Dshi_2431 at 2572.419 kb on - strand, within Dshi_2431 at 2572.424 kb on - strand, within Dshi_2431 at 2572.427 kb on + strand, within Dshi_2431 at 2572.465 kb on + strand, within Dshi_2431 at 2572.475 kb on - strand, within Dshi_2431 at 2572.513 kb on + strand, within Dshi_2431 at 2572.538 kb on + strand, within Dshi_2431 at 2572.560 kb on + strand, within Dshi_2431 at 2572.568 kb on - strand, within Dshi_2431 at 2572.570 kb on + strand, within Dshi_2431 at 2572.599 kb on - strand, within Dshi_2431 at 2572.605 kb on - strand, within Dshi_2431 at 2572.684 kb on + strand, within Dshi_2431 at 2572.747 kb on - strand, within Dshi_2431 at 2572.759 kb on + strand, within Dshi_2431 at 2572.759 kb on + strand, within Dshi_2431 at 2572.877 kb on - strand at 2572.935 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,570,673 - Dshi_2429 0.32 +0.2 2,570,712 + Dshi_2429 0.35 +1.6 2,570,729 + Dshi_2429 0.36 +0.5 2,570,737 - Dshi_2429 0.37 -1.5 2,570,747 + Dshi_2429 0.38 -1.8 2,570,771 + Dshi_2429 0.39 +0.4 2,570,779 - Dshi_2429 0.40 -0.9 2,570,813 - Dshi_2429 0.42 -1.4 2,570,956 - Dshi_2429 0.53 -0.7 2,570,975 - Dshi_2429 0.54 -1.6 2,571,132 + Dshi_2429 0.65 +0.6 2,571,132 + Dshi_2429 0.65 -1.6 2,571,197 + Dshi_2429 0.70 -0.7 2,571,214 - Dshi_2429 0.71 +1.5 2,571,227 + Dshi_2429 0.72 +0.4 2,571,287 + Dshi_2429 0.76 -0.1 2,571,287 + Dshi_2429 0.76 -0.8 2,571,302 + Dshi_2429 0.78 +0.2 2,571,495 - -0.0 2,571,638 + -0.8 2,571,665 + Dshi_2430 0.17 +0.9 2,571,665 - Dshi_2430 0.17 -0.1 2,571,726 + Dshi_2430 0.35 +0.8 2,571,875 - Dshi_2430 0.78 +0.4 2,572,168 + Dshi_2431 0.25 +0.8 2,572,181 - Dshi_2431 0.26 +0.4 2,572,301 + Dshi_2431 0.38 +0.6 2,572,401 + Dshi_2431 0.48 -0.5 2,572,409 - Dshi_2431 0.49 +0.3 2,572,419 - Dshi_2431 0.50 -0.4 2,572,424 - Dshi_2431 0.51 +1.0 2,572,427 + Dshi_2431 0.51 +0.1 2,572,465 + Dshi_2431 0.55 -1.1 2,572,475 - Dshi_2431 0.56 +0.2 2,572,513 + Dshi_2431 0.60 -0.4 2,572,538 + Dshi_2431 0.62 -3.0 2,572,560 + Dshi_2431 0.65 +0.4 2,572,568 - Dshi_2431 0.65 +0.3 2,572,570 + Dshi_2431 0.66 -0.1 2,572,599 - Dshi_2431 0.68 +0.4 2,572,605 - Dshi_2431 0.69 +0.7 2,572,684 + Dshi_2431 0.77 -0.6 2,572,747 - Dshi_2431 0.83 +0.5 2,572,759 + Dshi_2431 0.85 -0.8 2,572,759 + Dshi_2431 0.85 -0.6 2,572,877 - -0.8 2,572,935 - -0.0
Or see this region's nucleotide sequence