Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2372 and Dshi_2373 are separated by 230 nucleotides Dshi_2373 and Dshi_2374 are separated by 287 nucleotides
Dshi_2372: Dshi_2372 - orotate phosphoribosyltransferase (RefSeq), at 2,504,743 to 2,505,423
_2372
Dshi_2373: Dshi_2373 - replicative DNA helicase (RefSeq), at 2,505,654 to 2,507,174
_2373
Dshi_2374: Dshi_2374 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,507,462 to 2,508,685
_2374
Position (kb)
2505
2506
2507
2508 Strain fitness (log2 ratio)
-1
0
1 at 2504.693 kb on - strand at 2504.714 kb on - strand at 2504.789 kb on + strand at 2504.797 kb on - strand at 2504.857 kb on + strand, within Dshi_2372 at 2504.870 kb on - strand, within Dshi_2372 at 2504.893 kb on - strand, within Dshi_2372 at 2505.096 kb on + strand, within Dshi_2372 at 2505.104 kb on - strand, within Dshi_2372 at 2505.142 kb on + strand, within Dshi_2372 at 2505.294 kb on + strand, within Dshi_2372 at 2505.302 kb on - strand, within Dshi_2372 at 2505.302 kb on - strand, within Dshi_2372 at 2507.318 kb on - strand at 2507.369 kb on + strand at 2507.379 kb on + strand at 2507.404 kb on + strand at 2507.580 kb on - strand at 2507.623 kb on + strand, within Dshi_2374 at 2507.713 kb on - strand, within Dshi_2374 at 2507.748 kb on - strand, within Dshi_2374 at 2507.768 kb on - strand, within Dshi_2374 at 2507.843 kb on - strand, within Dshi_2374 at 2507.906 kb on - strand, within Dshi_2374 at 2508.092 kb on + strand, within Dshi_2374 at 2508.114 kb on + strand, within Dshi_2374
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,504,693 - -1.1 2,504,714 - +0.1 2,504,789 + +0.2 2,504,797 - +0.7 2,504,857 + Dshi_2372 0.17 +0.8 2,504,870 - Dshi_2372 0.19 +1.2 2,504,893 - Dshi_2372 0.22 -0.3 2,505,096 + Dshi_2372 0.52 +0.4 2,505,104 - Dshi_2372 0.53 +0.6 2,505,142 + Dshi_2372 0.59 +0.3 2,505,294 + Dshi_2372 0.81 +0.7 2,505,302 - Dshi_2372 0.82 +0.6 2,505,302 - Dshi_2372 0.82 -1.0 2,507,318 - -0.4 2,507,369 + -0.3 2,507,379 + -0.4 2,507,404 + +0.1 2,507,580 - -1.2 2,507,623 + Dshi_2374 0.13 -0.9 2,507,713 - Dshi_2374 0.21 -0.4 2,507,748 - Dshi_2374 0.23 +0.1 2,507,768 - Dshi_2374 0.25 +0.1 2,507,843 - Dshi_2374 0.31 +0.1 2,507,906 - Dshi_2374 0.36 +0.1 2,508,092 + Dshi_2374 0.51 +0.6 2,508,114 + Dshi_2374 0.53 -0.9
Or see this region's nucleotide sequence