Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2118 and Dshi_2119 are separated by 38 nucleotides Dshi_2119 and Dshi_2120 are separated by 184 nucleotides
Dshi_2118: Dshi_2118 - transcriptional regulator, AraC family (RefSeq), at 2,248,012 to 2,248,998
_2118
Dshi_2119: Dshi_2119 - choline/carnitine/betaine transporter (RefSeq), at 2,249,037 to 2,250,611
_2119
Dshi_2120: Dshi_2120 - ABC transporter related (RefSeq), at 2,250,796 to 2,251,926
_2120
Position (kb)
2249
2250
2251 Strain fitness (log2 ratio)
-2
-1
0
1 at 2248.045 kb on + strand at 2248.072 kb on - strand at 2248.205 kb on + strand, within Dshi_2118 at 2248.235 kb on + strand, within Dshi_2118 at 2248.235 kb on + strand, within Dshi_2118 at 2248.235 kb on + strand, within Dshi_2118 at 2248.235 kb on + strand, within Dshi_2118 at 2248.235 kb on + strand, within Dshi_2118 at 2248.243 kb on - strand, within Dshi_2118 at 2248.360 kb on - strand, within Dshi_2118 at 2248.381 kb on + strand, within Dshi_2118 at 2248.476 kb on - strand, within Dshi_2118 at 2248.481 kb on - strand, within Dshi_2118 at 2248.513 kb on - strand, within Dshi_2118 at 2248.519 kb on + strand, within Dshi_2118 at 2248.648 kb on + strand, within Dshi_2118 at 2248.761 kb on - strand, within Dshi_2118 at 2248.794 kb on + strand, within Dshi_2118 at 2248.802 kb on - strand, within Dshi_2118 at 2248.809 kb on + strand, within Dshi_2118 at 2248.864 kb on - strand, within Dshi_2118 at 2249.056 kb on + strand at 2249.170 kb on + strand at 2249.254 kb on + strand, within Dshi_2119 at 2249.256 kb on + strand, within Dshi_2119 at 2249.290 kb on + strand, within Dshi_2119 at 2249.393 kb on + strand, within Dshi_2119 at 2249.445 kb on - strand, within Dshi_2119 at 2249.566 kb on - strand, within Dshi_2119 at 2249.591 kb on + strand, within Dshi_2119 at 2249.628 kb on + strand, within Dshi_2119 at 2249.651 kb on + strand, within Dshi_2119 at 2249.661 kb on + strand, within Dshi_2119 at 2249.750 kb on + strand, within Dshi_2119 at 2249.762 kb on - strand, within Dshi_2119 at 2249.771 kb on - strand, within Dshi_2119 at 2249.801 kb on + strand, within Dshi_2119 at 2249.817 kb on + strand, within Dshi_2119 at 2249.818 kb on + strand, within Dshi_2119 at 2249.821 kb on - strand, within Dshi_2119 at 2249.854 kb on + strand, within Dshi_2119 at 2249.915 kb on - strand, within Dshi_2119 at 2249.935 kb on + strand, within Dshi_2119 at 2249.943 kb on - strand, within Dshi_2119 at 2249.964 kb on - strand, within Dshi_2119 at 2249.964 kb on - strand, within Dshi_2119 at 2249.978 kb on + strand, within Dshi_2119 at 2249.978 kb on + strand, within Dshi_2119 at 2249.979 kb on - strand, within Dshi_2119 at 2249.986 kb on - strand, within Dshi_2119 at 2249.986 kb on - strand, within Dshi_2119 at 2250.155 kb on + strand, within Dshi_2119 at 2250.155 kb on + strand, within Dshi_2119 at 2250.173 kb on - strand, within Dshi_2119 at 2250.207 kb on - strand, within Dshi_2119 at 2250.313 kb on + strand, within Dshi_2119 at 2250.313 kb on + strand, within Dshi_2119 at 2250.321 kb on - strand, within Dshi_2119 at 2250.321 kb on - strand, within Dshi_2119 at 2250.342 kb on + strand, within Dshi_2119 at 2250.416 kb on - strand, within Dshi_2119 at 2250.443 kb on + strand, within Dshi_2119 at 2250.588 kb on + strand at 2250.591 kb on - strand at 2250.591 kb on - strand at 2250.593 kb on + strand at 2250.593 kb on + strand at 2250.593 kb on + strand at 2250.593 kb on + strand at 2250.601 kb on - strand at 2250.606 kb on - strand at 2250.628 kb on + strand at 2250.636 kb on - strand at 2250.636 kb on - strand at 2250.717 kb on - strand at 2250.720 kb on + strand at 2250.728 kb on - strand at 2250.777 kb on + strand at 2250.802 kb on - strand at 2250.850 kb on + strand at 2250.922 kb on + strand, within Dshi_2120 at 2250.922 kb on - strand, within Dshi_2120 at 2250.959 kb on - strand, within Dshi_2120 at 2251.063 kb on + strand, within Dshi_2120 at 2251.071 kb on - strand, within Dshi_2120 at 2251.078 kb on - strand, within Dshi_2120 at 2251.089 kb on + strand, within Dshi_2120 at 2251.094 kb on + strand, within Dshi_2120 at 2251.107 kb on - strand, within Dshi_2120 at 2251.154 kb on - strand, within Dshi_2120 at 2251.229 kb on - strand, within Dshi_2120 at 2251.252 kb on - strand, within Dshi_2120 at 2251.252 kb on - strand, within Dshi_2120 at 2251.270 kb on + strand, within Dshi_2120 at 2251.300 kb on - strand, within Dshi_2120 at 2251.305 kb on + strand, within Dshi_2120 at 2251.325 kb on + strand, within Dshi_2120 at 2251.363 kb on + strand, within Dshi_2120 at 2251.367 kb on - strand, within Dshi_2120 at 2251.387 kb on + strand, within Dshi_2120 at 2251.422 kb on - strand, within Dshi_2120 at 2251.444 kb on + strand, within Dshi_2120 at 2251.447 kb on + strand, within Dshi_2120 at 2251.459 kb on + strand, within Dshi_2120 at 2251.459 kb on + strand, within Dshi_2120 at 2251.464 kb on + strand, within Dshi_2120 at 2251.464 kb on + strand, within Dshi_2120 at 2251.473 kb on - strand, within Dshi_2120 at 2251.484 kb on - strand, within Dshi_2120 at 2251.487 kb on + strand, within Dshi_2120
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,248,045 + -0.1 2,248,072 - +1.2 2,248,205 + Dshi_2118 0.20 -1.5 2,248,235 + Dshi_2118 0.23 +0.6 2,248,235 + Dshi_2118 0.23 +1.2 2,248,235 + Dshi_2118 0.23 +0.4 2,248,235 + Dshi_2118 0.23 +0.9 2,248,235 + Dshi_2118 0.23 +0.5 2,248,243 - Dshi_2118 0.23 +0.2 2,248,360 - Dshi_2118 0.35 -0.3 2,248,381 + Dshi_2118 0.37 +0.8 2,248,476 - Dshi_2118 0.47 -2.1 2,248,481 - Dshi_2118 0.48 +0.1 2,248,513 - Dshi_2118 0.51 -1.4 2,248,519 + Dshi_2118 0.51 +0.1 2,248,648 + Dshi_2118 0.64 -0.0 2,248,761 - Dshi_2118 0.76 +0.0 2,248,794 + Dshi_2118 0.79 -0.5 2,248,802 - Dshi_2118 0.80 +0.7 2,248,809 + Dshi_2118 0.81 -0.8 2,248,864 - Dshi_2118 0.86 -1.6 2,249,056 + -0.1 2,249,170 + -0.5 2,249,254 + Dshi_2119 0.14 -1.0 2,249,256 + Dshi_2119 0.14 -0.8 2,249,290 + Dshi_2119 0.16 -0.4 2,249,393 + Dshi_2119 0.23 +0.2 2,249,445 - Dshi_2119 0.26 -0.2 2,249,566 - Dshi_2119 0.34 +0.5 2,249,591 + Dshi_2119 0.35 -0.0 2,249,628 + Dshi_2119 0.38 +0.8 2,249,651 + Dshi_2119 0.39 -0.1 2,249,661 + Dshi_2119 0.40 -1.8 2,249,750 + Dshi_2119 0.45 -1.6 2,249,762 - Dshi_2119 0.46 +0.5 2,249,771 - Dshi_2119 0.47 +1.2 2,249,801 + Dshi_2119 0.49 +0.4 2,249,817 + Dshi_2119 0.50 -0.5 2,249,818 + Dshi_2119 0.50 +1.0 2,249,821 - Dshi_2119 0.50 -1.4 2,249,854 + Dshi_2119 0.52 +1.3 2,249,915 - Dshi_2119 0.56 -0.5 2,249,935 + Dshi_2119 0.57 -0.3 2,249,943 - Dshi_2119 0.58 +1.1 2,249,964 - Dshi_2119 0.59 -2.0 2,249,964 - Dshi_2119 0.59 +0.6 2,249,978 + Dshi_2119 0.60 -0.1 2,249,978 + Dshi_2119 0.60 -0.3 2,249,979 - Dshi_2119 0.60 +1.0 2,249,986 - Dshi_2119 0.60 -0.8 2,249,986 - Dshi_2119 0.60 +0.2 2,250,155 + Dshi_2119 0.71 +0.6 2,250,155 + Dshi_2119 0.71 -0.9 2,250,173 - Dshi_2119 0.72 -0.2 2,250,207 - Dshi_2119 0.74 -0.1 2,250,313 + Dshi_2119 0.81 -1.6 2,250,313 + Dshi_2119 0.81 +0.8 2,250,321 - Dshi_2119 0.82 +0.4 2,250,321 - Dshi_2119 0.82 -0.1 2,250,342 + Dshi_2119 0.83 +0.7 2,250,416 - Dshi_2119 0.88 -0.4 2,250,443 + Dshi_2119 0.89 +0.2 2,250,588 + -1.4 2,250,591 - -0.3 2,250,591 - -0.5 2,250,593 + -0.1 2,250,593 + +0.3 2,250,593 + +1.7 2,250,593 + -1.0 2,250,601 - +0.1 2,250,606 - -0.5 2,250,628 + -0.2 2,250,636 - -0.3 2,250,636 - -0.8 2,250,717 - -0.5 2,250,720 + -1.0 2,250,728 - +0.8 2,250,777 + -0.3 2,250,802 - +0.4 2,250,850 + +0.7 2,250,922 + Dshi_2120 0.11 -0.4 2,250,922 - Dshi_2120 0.11 -0.2 2,250,959 - Dshi_2120 0.14 +0.2 2,251,063 + Dshi_2120 0.24 -0.8 2,251,071 - Dshi_2120 0.24 -0.8 2,251,078 - Dshi_2120 0.25 -0.9 2,251,089 + Dshi_2120 0.26 -0.6 2,251,094 + Dshi_2120 0.26 -1.2 2,251,107 - Dshi_2120 0.27 +1.1 2,251,154 - Dshi_2120 0.32 -0.5 2,251,229 - Dshi_2120 0.38 +0.9 2,251,252 - Dshi_2120 0.40 +1.2 2,251,252 - Dshi_2120 0.40 -1.2 2,251,270 + Dshi_2120 0.42 -0.8 2,251,300 - Dshi_2120 0.45 +0.2 2,251,305 + Dshi_2120 0.45 -0.2 2,251,325 + Dshi_2120 0.47 -0.8 2,251,363 + Dshi_2120 0.50 -0.8 2,251,367 - Dshi_2120 0.50 +0.3 2,251,387 + Dshi_2120 0.52 +0.9 2,251,422 - Dshi_2120 0.55 -0.5 2,251,444 + Dshi_2120 0.57 +0.2 2,251,447 + Dshi_2120 0.58 -1.0 2,251,459 + Dshi_2120 0.59 -1.8 2,251,459 + Dshi_2120 0.59 -0.3 2,251,464 + Dshi_2120 0.59 -0.1 2,251,464 + Dshi_2120 0.59 +0.2 2,251,473 - Dshi_2120 0.60 +0.2 2,251,484 - Dshi_2120 0.61 -0.3 2,251,487 + Dshi_2120 0.61 +0.0
Or see this region's nucleotide sequence