Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1965 and Dshi_1966 are separated by 259 nucleotides Dshi_1966 and Dshi_1967 are separated by 12 nucleotides
Dshi_1965: Dshi_1965 - hypothetical protein (RefSeq), at 2,072,939 to 2,073,871
_1965
Dshi_1966: Dshi_1966 - dihydrolipoamide dehydrogenase (RefSeq), at 2,074,131 to 2,075,873
_1966
Dshi_1967: Dshi_1967 - catalytic domain of components of various dehydrogenase complexes (RefSeq), at 2,075,886 to 2,077,187
_1967
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2073.146 kb on + strand, within Dshi_1965 at 2073.302 kb on + strand, within Dshi_1965 at 2073.483 kb on + strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.605 kb on + strand, within Dshi_1965 at 2073.683 kb on + strand, within Dshi_1965 at 2073.709 kb on - strand, within Dshi_1965 at 2073.838 kb on + strand at 2073.904 kb on - strand at 2073.952 kb on - strand at 2074.020 kb on - strand at 2074.119 kb on + strand at 2074.237 kb on + strand at 2074.237 kb on - strand at 2074.247 kb on + strand at 2074.259 kb on - strand at 2074.288 kb on - strand at 2074.447 kb on + strand, within Dshi_1966 at 2074.479 kb on + strand, within Dshi_1966 at 2074.508 kb on - strand, within Dshi_1966 at 2074.542 kb on - strand, within Dshi_1966 at 2074.576 kb on + strand, within Dshi_1966 at 2074.586 kb on - strand, within Dshi_1966 at 2074.635 kb on + strand, within Dshi_1966 at 2074.656 kb on - strand, within Dshi_1966 at 2074.784 kb on + strand at 2074.819 kb on - strand, within Dshi_1966 at 2074.847 kb on + strand, within Dshi_1966 at 2075.035 kb on - strand, within Dshi_1966 at 2075.060 kb on + strand, within Dshi_1966 at 2075.068 kb on - strand, within Dshi_1966 at 2075.149 kb on - strand, within Dshi_1966 at 2075.223 kb on + strand, within Dshi_1966 at 2075.240 kb on - strand, within Dshi_1966 at 2075.882 kb on + strand at 2075.961 kb on - strand at 2075.972 kb on + strand at 2076.033 kb on - strand, within Dshi_1967 at 2076.092 kb on + strand, within Dshi_1967 at 2076.160 kb on - strand, within Dshi_1967 at 2076.160 kb on - strand, within Dshi_1967 at 2076.234 kb on - strand, within Dshi_1967 at 2076.281 kb on + strand, within Dshi_1967 at 2076.289 kb on - strand, within Dshi_1967 at 2076.363 kb on + strand, within Dshi_1967 at 2076.424 kb on + strand, within Dshi_1967 at 2076.424 kb on + strand, within Dshi_1967 at 2076.432 kb on - strand, within Dshi_1967 at 2076.432 kb on - strand, within Dshi_1967 at 2076.787 kb on - strand, within Dshi_1967 at 2076.791 kb on - strand, within Dshi_1967
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,073,146 + Dshi_1965 0.22 +0.2 2,073,302 + Dshi_1965 0.39 -1.3 2,073,483 + Dshi_1965 0.58 -0.2 2,073,491 - Dshi_1965 0.59 -0.8 2,073,491 - Dshi_1965 0.59 -0.1 2,073,491 - Dshi_1965 0.59 -0.6 2,073,605 + Dshi_1965 0.71 +0.7 2,073,683 + Dshi_1965 0.80 -0.9 2,073,709 - Dshi_1965 0.83 -0.5 2,073,838 + -1.1 2,073,904 - -0.0 2,073,952 - -0.4 2,074,020 - -0.3 2,074,119 + -0.3 2,074,237 + +0.4 2,074,237 - +1.7 2,074,247 + +0.2 2,074,259 - +0.9 2,074,288 - +0.8 2,074,447 + Dshi_1966 0.18 +1.6 2,074,479 + Dshi_1966 0.20 +0.8 2,074,508 - Dshi_1966 0.22 +0.8 2,074,542 - Dshi_1966 0.24 +0.4 2,074,576 + Dshi_1966 0.26 +2.4 2,074,586 - Dshi_1966 0.26 +0.3 2,074,635 + Dshi_1966 0.29 +0.7 2,074,656 - Dshi_1966 0.30 +0.7 2,074,784 + -1.8 2,074,819 - Dshi_1966 0.39 +0.4 2,074,847 + Dshi_1966 0.41 +0.7 2,075,035 - Dshi_1966 0.52 +0.8 2,075,060 + Dshi_1966 0.53 +0.1 2,075,068 - Dshi_1966 0.54 -0.1 2,075,149 - Dshi_1966 0.58 -0.7 2,075,223 + Dshi_1966 0.63 +0.3 2,075,240 - Dshi_1966 0.64 -0.2 2,075,882 + +1.9 2,075,961 - +1.8 2,075,972 + +1.4 2,076,033 - Dshi_1967 0.11 -1.3 2,076,092 + Dshi_1967 0.16 +0.3 2,076,160 - Dshi_1967 0.21 +0.7 2,076,160 - Dshi_1967 0.21 +0.6 2,076,234 - Dshi_1967 0.27 +0.1 2,076,281 + Dshi_1967 0.30 +1.1 2,076,289 - Dshi_1967 0.31 +0.7 2,076,363 + Dshi_1967 0.37 -0.1 2,076,424 + Dshi_1967 0.41 +0.0 2,076,424 + Dshi_1967 0.41 +0.9 2,076,432 - Dshi_1967 0.42 +0.9 2,076,432 - Dshi_1967 0.42 +0.8 2,076,787 - Dshi_1967 0.69 +0.6 2,076,791 - Dshi_1967 0.70 +0.2
Or see this region's nucleotide sequence