Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1925 and Dshi_1926 are separated by 87 nucleotides Dshi_1926 and Dshi_1927 are separated by 77 nucleotides Dshi_1927 and Dshi_1928 are separated by 57 nucleotides
Dshi_1925: Dshi_1925 - AAA ATPase (RefSeq), at 2,010,233 to 2,012,482
_1925
Dshi_1926: Dshi_1926 - primosomal protein N' (RefSeq), at 2,012,570 to 2,014,753
_1926
Dshi_1927: Dshi_1927 - putative transaldolase (RefSeq), at 2,014,831 to 2,015,484
_1927
Dshi_1928: Dshi_1928 - protein of unknown function DUF484 (RefSeq), at 2,015,542 to 2,016,249
_1928
Position (kb)
2012
2013
2014
2015 Strain fitness (log2 ratio)
-2
-1
0
1 at 2011.806 kb on - strand, within Dshi_1925 at 2011.848 kb on - strand, within Dshi_1925 at 2011.888 kb on - strand, within Dshi_1925 at 2011.995 kb on + strand, within Dshi_1925 at 2012.086 kb on - strand, within Dshi_1925 at 2012.232 kb on + strand, within Dshi_1925 at 2012.321 kb on - strand at 2012.321 kb on - strand at 2012.380 kb on - strand at 2012.470 kb on - strand at 2012.509 kb on - strand at 2012.548 kb on - strand at 2012.550 kb on - strand at 2014.740 kb on + strand at 2014.773 kb on + strand at 2014.773 kb on + strand at 2014.850 kb on + strand at 2014.985 kb on - strand, within Dshi_1927 at 2015.080 kb on - strand, within Dshi_1927 at 2015.088 kb on + strand, within Dshi_1927 at 2015.257 kb on - strand, within Dshi_1927 at 2015.308 kb on - strand, within Dshi_1927 at 2015.538 kb on + strand at 2015.546 kb on - strand at 2015.599 kb on + strand at 2015.695 kb on - strand, within Dshi_1928
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,011,806 - Dshi_1925 0.70 -1.3 2,011,848 - Dshi_1925 0.72 -1.2 2,011,888 - Dshi_1925 0.74 -0.4 2,011,995 + Dshi_1925 0.78 +0.0 2,012,086 - Dshi_1925 0.82 -1.6 2,012,232 + Dshi_1925 0.89 +0.3 2,012,321 - +0.7 2,012,321 - -0.6 2,012,380 - -0.4 2,012,470 - +0.3 2,012,509 - +0.7 2,012,548 - +1.0 2,012,550 - -0.5 2,014,740 + -0.7 2,014,773 + -1.1 2,014,773 + -2.1 2,014,850 + -0.2 2,014,985 - Dshi_1927 0.24 +0.5 2,015,080 - Dshi_1927 0.38 +0.8 2,015,088 + Dshi_1927 0.39 +1.3 2,015,257 - Dshi_1927 0.65 -1.7 2,015,308 - Dshi_1927 0.73 +1.3 2,015,538 + -0.5 2,015,546 - -2.7 2,015,599 + -2.3 2,015,695 - Dshi_1928 0.22 -0.7
Or see this region's nucleotide sequence