Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1646 and Dshi_1647 are separated by 79 nucleotides Dshi_1647 and Dshi_1648 are separated by 274 nucleotides
Dshi_1646: Dshi_1646 - inosine-5'-monophosphate dehydrogenase (RefSeq), at 1,709,530 to 1,710,984
_1646
Dshi_1647: Dshi_1647 - 2-dehydro-3-deoxyglucarate aldolase (RefSeq), at 1,711,064 to 1,711,846
_1647
Dshi_1648: Dshi_1648 - glucose/maltose/trehalose/sucrose ABC transporter, ATPase component (from data) , at 1,712,121 to 1,713,242
_1648
Position (kb)
1711
1712 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1710.188 kb on - strand, within Dshi_1646 at 1710.660 kb on + strand, within Dshi_1646 at 1710.703 kb on + strand, within Dshi_1646 at 1710.802 kb on - strand, within Dshi_1646 at 1711.035 kb on + strand at 1711.049 kb on + strand at 1711.057 kb on - strand at 1711.067 kb on + strand at 1711.216 kb on + strand, within Dshi_1647 at 1711.353 kb on + strand, within Dshi_1647 at 1711.370 kb on + strand, within Dshi_1647 at 1711.469 kb on + strand, within Dshi_1647 at 1711.499 kb on + strand, within Dshi_1647 at 1711.629 kb on + strand, within Dshi_1647 at 1711.769 kb on + strand at 1711.850 kb on - strand at 1711.946 kb on - strand at 1711.987 kb on + strand at 1712.079 kb on - strand at 1712.186 kb on + strand at 1712.237 kb on - strand, within Dshi_1648 at 1712.266 kb on + strand, within Dshi_1648 at 1712.277 kb on + strand, within Dshi_1648 at 1712.334 kb on - strand, within Dshi_1648 at 1712.379 kb on - strand, within Dshi_1648 at 1712.413 kb on + strand, within Dshi_1648 at 1712.459 kb on - strand, within Dshi_1648 at 1712.476 kb on + strand, within Dshi_1648 at 1712.482 kb on + strand, within Dshi_1648 at 1712.536 kb on + strand, within Dshi_1648 at 1712.580 kb on + strand, within Dshi_1648 at 1712.588 kb on - strand, within Dshi_1648 at 1712.590 kb on + strand, within Dshi_1648 at 1712.598 kb on - strand, within Dshi_1648 at 1712.598 kb on - strand, within Dshi_1648 at 1712.679 kb on - strand, within Dshi_1648 at 1712.791 kb on - strand, within Dshi_1648 at 1712.845 kb on + strand, within Dshi_1648
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,710,188 - Dshi_1646 0.45 -0.9 1,710,660 + Dshi_1646 0.78 +0.7 1,710,703 + Dshi_1646 0.81 -1.9 1,710,802 - Dshi_1646 0.87 -0.2 1,711,035 + -0.2 1,711,049 + -1.0 1,711,057 - -0.7 1,711,067 + -0.5 1,711,216 + Dshi_1647 0.19 +0.1 1,711,353 + Dshi_1647 0.37 -1.3 1,711,370 + Dshi_1647 0.39 -0.7 1,711,469 + Dshi_1647 0.52 +0.3 1,711,499 + Dshi_1647 0.56 -0.2 1,711,629 + Dshi_1647 0.72 -0.4 1,711,769 + -0.2 1,711,850 - -0.4 1,711,946 - -0.8 1,711,987 + -1.0 1,712,079 - +0.2 1,712,186 + +1.9 1,712,237 - Dshi_1648 0.10 +0.9 1,712,266 + Dshi_1648 0.13 +1.4 1,712,277 + Dshi_1648 0.14 +1.5 1,712,334 - Dshi_1648 0.19 +1.2 1,712,379 - Dshi_1648 0.23 +2.0 1,712,413 + Dshi_1648 0.26 +1.2 1,712,459 - Dshi_1648 0.30 -2.2 1,712,476 + Dshi_1648 0.32 +1.4 1,712,482 + Dshi_1648 0.32 -1.0 1,712,536 + Dshi_1648 0.37 +1.4 1,712,580 + Dshi_1648 0.41 +1.6 1,712,588 - Dshi_1648 0.42 +2.3 1,712,590 + Dshi_1648 0.42 +1.3 1,712,598 - Dshi_1648 0.43 +0.2 1,712,598 - Dshi_1648 0.43 +1.0 1,712,679 - Dshi_1648 0.50 +1.9 1,712,791 - Dshi_1648 0.60 +1.1 1,712,845 + Dshi_1648 0.65 +1.7
Or see this region's nucleotide sequence