Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1584 and Dshi_1585 are separated by 193 nucleotides Dshi_1585 and Dshi_1586 are separated by 17 nucleotides Dshi_1586 and Dshi_1587 are separated by 196 nucleotides
Dshi_1584: Dshi_1584 - hypothetical protein (RefSeq), at 1,649,803 to 1,650,927
_1584
Dshi_1585: Dshi_1585 - hypothetical protein (RefSeq), at 1,651,121 to 1,651,423
_1585
Dshi_1586: Dshi_1586 - trimethylamine methyltransferase (RefSeq), at 1,651,441 to 1,652,988
_1586
Dshi_1587: Dshi_1587 - GMP synthase, large subunit (RefSeq), at 1,653,185 to 1,654,747
_1587
Position (kb)
1651
1652
1653 Strain fitness (log2 ratio)
-2
-1
0
1 at 1650.474 kb on - strand, within Dshi_1584 at 1650.500 kb on - strand, within Dshi_1584 at 1650.597 kb on - strand, within Dshi_1584 at 1650.661 kb on + strand, within Dshi_1584 at 1650.705 kb on - strand, within Dshi_1584 at 1650.724 kb on - strand, within Dshi_1584 at 1650.783 kb on - strand, within Dshi_1584 at 1650.792 kb on - strand, within Dshi_1584 at 1650.813 kb on + strand, within Dshi_1584 at 1650.874 kb on + strand at 1650.909 kb on - strand at 1651.047 kb on - strand at 1651.117 kb on + strand at 1651.118 kb on - strand at 1651.125 kb on - strand at 1651.149 kb on - strand at 1651.161 kb on + strand, within Dshi_1585 at 1651.168 kb on - strand, within Dshi_1585 at 1651.185 kb on + strand, within Dshi_1585 at 1651.272 kb on - strand, within Dshi_1585 at 1651.300 kb on + strand, within Dshi_1585 at 1651.322 kb on - strand, within Dshi_1585 at 1651.337 kb on - strand, within Dshi_1585 at 1651.392 kb on - strand, within Dshi_1585 at 1651.435 kb on - strand at 1651.435 kb on - strand at 1651.487 kb on - strand at 1651.526 kb on + strand at 1651.530 kb on + strand at 1651.601 kb on - strand, within Dshi_1586 at 1651.604 kb on + strand, within Dshi_1586 at 1651.614 kb on + strand, within Dshi_1586 at 1651.759 kb on - strand, within Dshi_1586 at 1651.926 kb on + strand, within Dshi_1586 at 1652.010 kb on - strand, within Dshi_1586 at 1652.092 kb on + strand, within Dshi_1586 at 1652.115 kb on - strand, within Dshi_1586 at 1652.122 kb on + strand, within Dshi_1586 at 1652.128 kb on - strand, within Dshi_1586 at 1652.130 kb on - strand, within Dshi_1586 at 1652.220 kb on - strand, within Dshi_1586 at 1652.227 kb on + strand, within Dshi_1586 at 1652.267 kb on - strand, within Dshi_1586 at 1652.308 kb on + strand, within Dshi_1586 at 1652.345 kb on - strand, within Dshi_1586 at 1652.581 kb on + strand, within Dshi_1586 at 1652.610 kb on + strand, within Dshi_1586 at 1652.639 kb on + strand, within Dshi_1586 at 1652.674 kb on + strand, within Dshi_1586 at 1652.763 kb on + strand, within Dshi_1586 at 1652.787 kb on - strand, within Dshi_1586 at 1652.912 kb on - strand at 1652.987 kb on + strand at 1652.995 kb on - strand at 1653.011 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,650,474 - Dshi_1584 0.60 -0.2 1,650,500 - Dshi_1584 0.62 -0.5 1,650,597 - Dshi_1584 0.71 -0.8 1,650,661 + Dshi_1584 0.76 -1.2 1,650,705 - Dshi_1584 0.80 +1.0 1,650,724 - Dshi_1584 0.82 -0.4 1,650,783 - Dshi_1584 0.87 +0.5 1,650,792 - Dshi_1584 0.88 +0.4 1,650,813 + Dshi_1584 0.90 -0.3 1,650,874 + -1.4 1,650,909 - -0.1 1,651,047 - -0.4 1,651,117 + -0.6 1,651,118 - +0.4 1,651,125 - -0.4 1,651,149 - -1.2 1,651,161 + Dshi_1585 0.13 -0.1 1,651,168 - Dshi_1585 0.16 -0.2 1,651,185 + Dshi_1585 0.21 +0.5 1,651,272 - Dshi_1585 0.50 -0.4 1,651,300 + Dshi_1585 0.59 -0.6 1,651,322 - Dshi_1585 0.66 +0.4 1,651,337 - Dshi_1585 0.71 -0.4 1,651,392 - Dshi_1585 0.89 +0.0 1,651,435 - -0.2 1,651,435 - -0.8 1,651,487 - +0.3 1,651,526 + -0.1 1,651,530 + -2.0 1,651,601 - Dshi_1586 0.10 +0.1 1,651,604 + Dshi_1586 0.11 +1.4 1,651,614 + Dshi_1586 0.11 -1.4 1,651,759 - Dshi_1586 0.21 -0.6 1,651,926 + Dshi_1586 0.31 +0.2 1,652,010 - Dshi_1586 0.37 +0.2 1,652,092 + Dshi_1586 0.42 -0.2 1,652,115 - Dshi_1586 0.44 +0.6 1,652,122 + Dshi_1586 0.44 +0.2 1,652,128 - Dshi_1586 0.44 +0.4 1,652,130 - Dshi_1586 0.45 +0.4 1,652,220 - Dshi_1586 0.50 +0.2 1,652,227 + Dshi_1586 0.51 -0.7 1,652,267 - Dshi_1586 0.53 +1.2 1,652,308 + Dshi_1586 0.56 -1.0 1,652,345 - Dshi_1586 0.58 +0.1 1,652,581 + Dshi_1586 0.74 +0.2 1,652,610 + Dshi_1586 0.76 +0.5 1,652,639 + Dshi_1586 0.77 -1.4 1,652,674 + Dshi_1586 0.80 +0.8 1,652,763 + Dshi_1586 0.85 -0.9 1,652,787 - Dshi_1586 0.87 +0.2 1,652,912 - +0.6 1,652,987 + +0.2 1,652,995 - -0.9 1,653,011 - -0.8
Or see this region's nucleotide sequence