Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1487 and Dshi_1488 are separated by 69 nucleotides Dshi_1488 and Dshi_1489 are separated by 10 nucleotides
Dshi_1487: Dshi_1487 - oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq), at 1,544,432 to 1,546,513
_1487
Dshi_1488: Dshi_1488 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,546,583 to 1,547,743
_1488
Dshi_1489: Dshi_1489 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,547,754 to 1,548,845
_1489
Position (kb)
1546
1547
1548 Strain fitness (log2 ratio)
-1
0
1 at 1545.819 kb on + strand, within Dshi_1487 at 1545.827 kb on - strand, within Dshi_1487 at 1545.875 kb on - strand, within Dshi_1487 at 1546.029 kb on + strand, within Dshi_1487 at 1546.037 kb on - strand, within Dshi_1487 at 1546.070 kb on - strand, within Dshi_1487 at 1546.135 kb on - strand, within Dshi_1487 at 1546.350 kb on + strand at 1546.494 kb on - strand at 1546.550 kb on - strand at 1546.636 kb on + strand at 1546.636 kb on + strand at 1546.651 kb on + strand at 1546.770 kb on + strand, within Dshi_1488 at 1546.780 kb on + strand, within Dshi_1488 at 1547.052 kb on - strand, within Dshi_1488 at 1547.473 kb on - strand, within Dshi_1488 at 1547.664 kb on - strand at 1547.942 kb on - strand, within Dshi_1489 at 1548.048 kb on - strand, within Dshi_1489 at 1548.048 kb on - strand, within Dshi_1489 at 1548.097 kb on + strand, within Dshi_1489 at 1548.152 kb on + strand, within Dshi_1489 at 1548.199 kb on + strand, within Dshi_1489 at 1548.618 kb on + strand, within Dshi_1489
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,545,819 + Dshi_1487 0.67 +0.1 1,545,827 - Dshi_1487 0.67 +0.5 1,545,875 - Dshi_1487 0.69 -0.2 1,546,029 + Dshi_1487 0.77 +0.2 1,546,037 - Dshi_1487 0.77 -0.9 1,546,070 - Dshi_1487 0.79 +1.0 1,546,135 - Dshi_1487 0.82 +1.4 1,546,350 + -0.3 1,546,494 - +0.1 1,546,550 - -0.8 1,546,636 + -0.5 1,546,636 + -0.2 1,546,651 + -1.0 1,546,770 + Dshi_1488 0.16 -0.3 1,546,780 + Dshi_1488 0.17 +1.6 1,547,052 - Dshi_1488 0.40 +0.0 1,547,473 - Dshi_1488 0.77 +0.4 1,547,664 - -0.5 1,547,942 - Dshi_1489 0.17 -0.4 1,548,048 - Dshi_1489 0.27 -0.1 1,548,048 - Dshi_1489 0.27 +1.4 1,548,097 + Dshi_1489 0.31 -1.0 1,548,152 + Dshi_1489 0.36 -0.2 1,548,199 + Dshi_1489 0.41 +0.2 1,548,618 + Dshi_1489 0.79 +1.4
Or see this region's nucleotide sequence