Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1296 and Dshi_1297 are separated by 165 nucleotides Dshi_1297 and Dshi_1298 are separated by 24 nucleotides Dshi_1298 and Dshi_1299 are separated by 74 nucleotides
Dshi_1296: Dshi_1296 - DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq), at 1,349,879 to 1,351,090
_1296
Dshi_1297: Dshi_1297 - acyl-CoA dehydrogenase domain protein (RefSeq), at 1,351,256 to 1,352,419
_1297
Dshi_1298: Dshi_1298 - hypothetical protein (RefSeq), at 1,352,444 to 1,352,782
_1298
Dshi_1299: Dshi_1299 - OmpW family protein (RefSeq), at 1,352,857 to 1,353,465
_1299
Position (kb)
1351
1352
1353 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1350.392 kb on - strand, within Dshi_1296 at 1350.540 kb on + strand, within Dshi_1296 at 1350.713 kb on + strand, within Dshi_1296 at 1350.713 kb on + strand, within Dshi_1296 at 1350.847 kb on + strand, within Dshi_1296 at 1350.941 kb on + strand, within Dshi_1296 at 1350.949 kb on - strand, within Dshi_1296 at 1350.981 kb on + strand at 1351.192 kb on + strand at 1351.570 kb on + strand, within Dshi_1297 at 1351.575 kb on + strand, within Dshi_1297 at 1351.600 kb on - strand, within Dshi_1297 at 1351.647 kb on - strand, within Dshi_1297 at 1351.774 kb on - strand, within Dshi_1297 at 1351.848 kb on + strand, within Dshi_1297 at 1351.996 kb on - strand, within Dshi_1297 at 1352.049 kb on + strand, within Dshi_1297 at 1352.116 kb on + strand, within Dshi_1297 at 1352.158 kb on + strand, within Dshi_1297 at 1352.223 kb on + strand, within Dshi_1297 at 1352.250 kb on + strand, within Dshi_1297 at 1352.273 kb on + strand, within Dshi_1297 at 1352.278 kb on + strand, within Dshi_1297 at 1352.334 kb on - strand at 1352.399 kb on - strand at 1352.511 kb on + strand, within Dshi_1298 at 1352.599 kb on + strand, within Dshi_1298 at 1352.616 kb on + strand, within Dshi_1298 at 1352.621 kb on - strand, within Dshi_1298 at 1352.828 kb on + strand at 1352.829 kb on + strand at 1352.855 kb on + strand at 1352.862 kb on - strand at 1352.884 kb on - strand at 1353.095 kb on - strand, within Dshi_1299 at 1353.119 kb on + strand, within Dshi_1299 at 1353.119 kb on + strand, within Dshi_1299 at 1353.369 kb on - strand, within Dshi_1299
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,350,392 - Dshi_1296 0.42 +1.6 1,350,540 + Dshi_1296 0.55 -0.1 1,350,713 + Dshi_1296 0.69 +0.6 1,350,713 + Dshi_1296 0.69 +0.4 1,350,847 + Dshi_1296 0.80 -0.7 1,350,941 + Dshi_1296 0.88 +0.0 1,350,949 - Dshi_1296 0.88 -0.7 1,350,981 + +0.3 1,351,192 + -0.9 1,351,570 + Dshi_1297 0.27 +0.1 1,351,575 + Dshi_1297 0.27 -3.5 1,351,600 - Dshi_1297 0.30 -0.3 1,351,647 - Dshi_1297 0.34 +0.3 1,351,774 - Dshi_1297 0.45 +0.8 1,351,848 + Dshi_1297 0.51 -1.6 1,351,996 - Dshi_1297 0.64 -0.6 1,352,049 + Dshi_1297 0.68 +0.3 1,352,116 + Dshi_1297 0.74 -0.1 1,352,158 + Dshi_1297 0.77 +0.7 1,352,223 + Dshi_1297 0.83 -0.4 1,352,250 + Dshi_1297 0.85 +0.3 1,352,273 + Dshi_1297 0.87 -0.6 1,352,278 + Dshi_1297 0.88 -0.3 1,352,334 - +0.3 1,352,399 - -1.4 1,352,511 + Dshi_1298 0.20 +0.9 1,352,599 + Dshi_1298 0.46 +0.4 1,352,616 + Dshi_1298 0.51 +1.3 1,352,621 - Dshi_1298 0.52 +2.0 1,352,828 + -1.8 1,352,829 + +1.3 1,352,855 + +1.4 1,352,862 - -3.0 1,352,884 - -1.0 1,353,095 - Dshi_1299 0.39 -0.1 1,353,119 + Dshi_1299 0.43 -1.3 1,353,119 + Dshi_1299 0.43 -2.5 1,353,369 - Dshi_1299 0.84 +0.1
Or see this region's nucleotide sequence