Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0828 and Dshi_0829 overlap by 4 nucleotides Dshi_0829 and Dshi_0830 overlap by 4 nucleotides Dshi_0830 and Dshi_0831 overlap by 4 nucleotides
Dshi_0828: Dshi_0828 - pyrimidine-nucleoside phosphorylase (RefSeq), at 835,752 to 837,059
_0828
Dshi_0829: Dshi_0829 - Phosphopentomutase (EC 5.4.2.7) <small>(from data)</small>, at 837,056 to 838,255
_0829
Dshi_0830: Dshi_0830 - Adenosine deaminase (EC 3.5.4.4) <small>(from data)</small>, at 838,252 to 839,247
_0830
Dshi_0831: Dshi_0831 - uracil phosphoribosyltransferase (RefSeq), at 839,244 to 839,876
_0831
Position (kb) 837
838
839 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 836.098 kb on - strand, within Dshi_0828 at 836.237 kb on + strand, within Dshi_0828 at 836.237 kb on + strand, within Dshi_0828 at 836.330 kb on - strand, within Dshi_0828 at 836.364 kb on - strand, within Dshi_0828 at 836.474 kb on - strand, within Dshi_0828 at 836.621 kb on + strand, within Dshi_0828 at 836.852 kb on + strand, within Dshi_0828 at 836.942 kb on + strand at 836.970 kb on - strand at 837.156 kb on - strand at 837.166 kb on - strand at 837.405 kb on + strand, within Dshi_0829 at 837.490 kb on - strand, within Dshi_0829 at 837.572 kb on + strand, within Dshi_0829 at 837.778 kb on + strand, within Dshi_0829 at 837.892 kb on + strand, within Dshi_0829 at 837.923 kb on + strand, within Dshi_0829 at 838.001 kb on + strand, within Dshi_0829 at 838.022 kb on - strand, within Dshi_0829 at 838.104 kb on + strand, within Dshi_0829 at 838.104 kb on + strand, within Dshi_0829 at 838.112 kb on - strand, within Dshi_0829 at 838.435 kb on - strand, within Dshi_0830 at 838.516 kb on - strand, within Dshi_0830 at 838.636 kb on + strand, within Dshi_0830 at 838.733 kb on - strand, within Dshi_0830 at 838.746 kb on + strand, within Dshi_0830 at 839.002 kb on - strand, within Dshi_0830 at 839.154 kb on + strand at 839.247 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 836,098 - Dshi_0828 0.26 +0.2 836,237 + Dshi_0828 0.37 -0.7 836,237 + Dshi_0828 0.37 -0.4 836,330 - Dshi_0828 0.44 -0.9 836,364 - Dshi_0828 0.47 +0.7 836,474 - Dshi_0828 0.55 -0.5 836,621 + Dshi_0828 0.66 -0.4 836,852 + Dshi_0828 0.84 +0.7 836,942 + -2.9 836,970 - -0.3 837,156 - +0.3 837,166 - -0.2 837,405 + Dshi_0829 0.29 +0.9 837,490 - Dshi_0829 0.36 -0.8 837,572 + Dshi_0829 0.43 -1.3 837,778 + Dshi_0829 0.60 -0.5 837,892 + Dshi_0829 0.70 -0.1 837,923 + Dshi_0829 0.72 -0.4 838,001 + Dshi_0829 0.79 -3.3 838,022 - Dshi_0829 0.81 +0.9 838,104 + Dshi_0829 0.87 +0.2 838,104 + Dshi_0829 0.87 -0.4 838,112 - Dshi_0829 0.88 -0.0 838,435 - Dshi_0830 0.18 +0.5 838,516 - Dshi_0830 0.27 -0.5 838,636 + Dshi_0830 0.39 +0.4 838,733 - Dshi_0830 0.48 +0.2 838,746 + Dshi_0830 0.50 +0.2 839,002 - Dshi_0830 0.75 +0.0 839,154 + +0.2 839,247 + -1.4
Or see this region's nucleotide sequence