Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0657 and Dshi_0658 overlap by 4 nucleotides Dshi_0658 and Dshi_0659 are separated by 177 nucleotides
Dshi_0657: Dshi_0657 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 659,994 to 661,172
_0657
Dshi_0658: Dshi_0658 - ABC transporter related (RefSeq), at 661,169 to 662,770
_0658
Dshi_0659: Dshi_0659 - oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 662,948 to 664,309
_0659
Position (kb) 661
662
663 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 660.316 kb on + strand, within Dshi_0657 at 660.334 kb on + strand, within Dshi_0657 at 660.342 kb on - strand, within Dshi_0657 at 660.368 kb on + strand, within Dshi_0657 at 660.416 kb on + strand, within Dshi_0657 at 660.433 kb on - strand, within Dshi_0657 at 660.633 kb on + strand, within Dshi_0657 at 660.756 kb on - strand, within Dshi_0657 at 660.772 kb on - strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.810 kb on - strand, within Dshi_0657 at 660.900 kb on + strand, within Dshi_0657 at 661.235 kb on - strand at 661.254 kb on + strand at 661.254 kb on + strand at 661.368 kb on - strand, within Dshi_0658 at 661.394 kb on - strand, within Dshi_0658 at 661.521 kb on + strand, within Dshi_0658 at 661.673 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.853 kb on - strand, within Dshi_0658 at 661.886 kb on + strand, within Dshi_0658 at 661.991 kb on - strand, within Dshi_0658 at 662.026 kb on + strand, within Dshi_0658 at 662.103 kb on + strand, within Dshi_0658 at 662.104 kb on - strand, within Dshi_0658 at 662.172 kb on + strand, within Dshi_0658 at 662.214 kb on - strand, within Dshi_0658 at 662.261 kb on - strand, within Dshi_0658 at 662.273 kb on + strand, within Dshi_0658 at 662.311 kb on + strand, within Dshi_0658 at 662.319 kb on - strand, within Dshi_0658 at 662.348 kb on - strand, within Dshi_0658 at 662.352 kb on + strand, within Dshi_0658 at 662.509 kb on - strand, within Dshi_0658 at 662.590 kb on + strand, within Dshi_0658 at 662.590 kb on + strand, within Dshi_0658 at 662.591 kb on + strand, within Dshi_0658 at 662.613 kb on + strand at 662.613 kb on + strand at 662.613 kb on + strand at 662.614 kb on + strand at 662.637 kb on + strand at 662.845 kb on + strand at 663.037 kb on + strand at 663.099 kb on - strand, within Dshi_0659 at 663.112 kb on - strand, within Dshi_0659 at 663.116 kb on + strand, within Dshi_0659 at 663.122 kb on - strand, within Dshi_0659 at 663.246 kb on - strand, within Dshi_0659 at 663.301 kb on + strand, within Dshi_0659 at 663.311 kb on - strand, within Dshi_0659 at 663.312 kb on + strand, within Dshi_0659 at 663.375 kb on - strand, within Dshi_0659 at 663.508 kb on + strand, within Dshi_0659 at 663.516 kb on - strand, within Dshi_0659 at 663.520 kb on + strand, within Dshi_0659 at 663.530 kb on + strand, within Dshi_0659
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 660,316 + Dshi_0657 0.27 +0.2 660,334 + Dshi_0657 0.29 -0.3 660,342 - Dshi_0657 0.30 +0.6 660,368 + Dshi_0657 0.32 -0.0 660,416 + Dshi_0657 0.36 +0.2 660,433 - Dshi_0657 0.37 -0.2 660,633 + Dshi_0657 0.54 -1.5 660,756 - Dshi_0657 0.65 +0.4 660,772 - Dshi_0657 0.66 -0.8 660,792 + Dshi_0657 0.68 -0.3 660,792 + Dshi_0657 0.68 +0.4 660,792 + Dshi_0657 0.68 -0.2 660,810 - Dshi_0657 0.69 -0.0 660,900 + Dshi_0657 0.77 +1.8 661,235 - -1.0 661,254 + -0.5 661,254 + -0.1 661,368 - Dshi_0658 0.12 -0.0 661,394 - Dshi_0658 0.14 -1.0 661,521 + Dshi_0658 0.22 +0.9 661,673 - Dshi_0658 0.31 +1.0 661,811 - Dshi_0658 0.40 +0.0 661,811 - Dshi_0658 0.40 +1.9 661,853 - Dshi_0658 0.43 -0.1 661,886 + Dshi_0658 0.45 +0.4 661,991 - Dshi_0658 0.51 -1.5 662,026 + Dshi_0658 0.53 +0.9 662,103 + Dshi_0658 0.58 +1.2 662,104 - Dshi_0658 0.58 -0.1 662,172 + Dshi_0658 0.63 -0.5 662,214 - Dshi_0658 0.65 +2.2 662,261 - Dshi_0658 0.68 -0.6 662,273 + Dshi_0658 0.69 -0.2 662,311 + Dshi_0658 0.71 +0.3 662,319 - Dshi_0658 0.72 -0.4 662,348 - Dshi_0658 0.74 +0.9 662,352 + Dshi_0658 0.74 +0.8 662,509 - Dshi_0658 0.84 +2.5 662,590 + Dshi_0658 0.89 +1.8 662,590 + Dshi_0658 0.89 +0.2 662,591 + Dshi_0658 0.89 +0.2 662,613 + -3.5 662,613 + -0.5 662,613 + +0.3 662,614 + +0.5 662,637 + +0.6 662,845 + -0.3 663,037 + -0.5 663,099 - Dshi_0659 0.11 -0.6 663,112 - Dshi_0659 0.12 -0.1 663,116 + Dshi_0659 0.12 -0.0 663,122 - Dshi_0659 0.13 -0.0 663,246 - Dshi_0659 0.22 +2.2 663,301 + Dshi_0659 0.26 +0.9 663,311 - Dshi_0659 0.27 +0.7 663,312 + Dshi_0659 0.27 -0.3 663,375 - Dshi_0659 0.31 +2.2 663,508 + Dshi_0659 0.41 -0.1 663,516 - Dshi_0659 0.42 -1.3 663,520 + Dshi_0659 0.42 -1.0 663,530 + Dshi_0659 0.43 -0.2
Or see this region's nucleotide sequence