Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0203
Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
200,654 | + | -0.1 | |||
200,786 | + | Dshi_0202 | 0.22 | -1.2 | |
200,786 | + | Dshi_0202 | 0.22 | +0.1 | |
200,992 | + | Dshi_0202 | 0.84 | -2.5 | |
201,059 | - | +0.1 | |||
201,132 | - | -3.6 | |||
201,194 | - | Dshi_0203 | 0.11 | -3.3 | |
201,715 | + | Dshi_0203 | 0.83 | -2.2 | |
201,875 | + | -1.3 | |||
202,055 | + | -1.5 | |||
202,055 | + | +1.8 | |||
202,123 | - | Dshi_0204 | 0.13 | +0.6 | |
202,301 | - | Dshi_0204 | 0.24 | +1.1 | |
202,312 | - | Dshi_0204 | 0.24 | -0.5 | |
202,382 | + | Dshi_0204 | 0.28 | +0.3 | |
202,467 | - | Dshi_0204 | 0.33 | +0.5 | |
202,527 | + | Dshi_0204 | 0.37 | +1.4 | |
202,550 | + | Dshi_0204 | 0.38 | +2.1 | |
202,577 | - | Dshi_0204 | 0.40 | +1.3 | |
202,590 | - | Dshi_0204 | 0.41 | +1.6 | |
202,642 | + | Dshi_0204 | 0.44 | +1.7 | |
202,657 | + | Dshi_0204 | 0.45 | +1.3 | |
202,685 | + | Dshi_0204 | 0.46 | +1.1 |
Or see this region's nucleotide sequence