Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3772

Experiment: BHIS with Ceftazidime 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Ceftazidime 0.5 mg/ml
4,891,591	+		BT3770	0.65	-3.1
4,891,670	+		BT3770	0.79	-0.7
4,891,780	+				-1.1
4,891,780	+				-2.2
4,891,780	+				-1.9
4,892,552	+				+3.3
4,892,552	+				+2.2
4,892,556	+				-0.9
4,892,567	+				+0.1
4,892,594	+				-0.7
4,892,596	+				+5.1
4,892,596	+				-0.9
4,892,596	+				+0.8
4,892,596	+				-0.2
4,892,680	-		BT3772	0.17	+2.8
4,892,680	-		BT3772	0.17	+0.4
4,892,695	-		BT3772	0.19	+2.5
4,892,889	+		BT3772	0.48	-1.2
4,892,890	-		BT3772	0.48	-1.7
4,893,094	-		BT3772	0.78	+0.4
4,893,371	-				+0.2
4,893,491	-				-0.6
4,893,517	+				-1.1
4,893,517	+				-2.1
4,893,530	-				-0.6
4,893,530	-				+0.3
4,893,558	-				+0.1
4,893,558	-				+0.7
4,893,562	+				-1.1
4,893,615	+				+0.1
4,893,647	-		BT3773	0.10	-0.5
4,893,647	-		BT3773	0.10	+0.2
4,893,687	-		BT3773	0.12	-1.1
4,893,702	+		BT3773	0.13	+0.1
4,893,703	-		BT3773	0.13	-3.0
4,893,727	-		BT3773	0.14	+0.1
4,893,774	-		BT3773	0.16	+0.2
4,893,774	-		BT3773	0.16	+0.7
4,893,774	-		BT3773	0.16	+0.6
4,893,816	-		BT3773	0.18	+4.0
4,893,833	-		BT3773	0.18	+1.2
4,893,853	+		BT3773	0.19	+0.2
4,893,854	-		BT3773	0.19	-0.6
4,893,854	-		BT3773	0.19	-0.7
4,893,858	+		BT3773	0.20	+0.3
4,893,880	-		BT3773	0.21	+0.4
4,893,880	-		BT3773	0.21	-0.0
4,893,880	-		BT3773	0.21	+0.4
4,893,906	+		BT3773	0.22	+1.0
4,893,907	-		BT3773	0.22	-0.1
4,893,907	-		BT3773	0.22	+0.5
4,893,934	-		BT3773	0.23	+0.3
4,893,934	-		BT3773	0.23	+1.2
4,893,935	+		BT3773	0.23	-0.3
4,893,983	-		BT3773	0.25	+0.9
4,893,983	-		BT3773	0.25	-1.9
4,893,983	-		BT3773	0.25	+2.1
4,893,996	-		BT3773	0.26	-0.2
4,894,004	-		BT3773	0.26	-1.4
4,894,005	+		BT3773	0.26	-1.1
4,894,006	-		BT3773	0.26	-1.8
4,894,057	+				-0.9
4,894,102	+		BT3773	0.30	-0.3
4,894,102	+		BT3773	0.30	+1.8
4,894,103	-		BT3773	0.30	-0.4
4,894,194	+		BT3773	0.34	+0.1
4,894,204	-		BT3773	0.35	-0.0