Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2691

Experiment: BHIS with Ceftazidime 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Ceftazidime 0.5 mg/ml
3,353,049	-		BT2690	0.41	+0.7
3,353,060	+		BT2690	0.42	-1.7
3,353,069	-		BT2690	0.42	-1.3
3,353,107	-		BT2690	0.45	+1.1
3,353,196	+		BT2690	0.51	-1.1
3,353,311	-		BT2690	0.58	-1.1
3,353,311	-		BT2690	0.58	+0.5
3,353,561	+		BT2690	0.75	+0.6
3,353,578	-		BT2690	0.76	-1.6
3,353,726	+		BT2690	0.86	-2.0
3,353,727	-		BT2690	0.86	-0.3
3,353,913	+				+1.7
3,353,913	+				-1.8
3,353,914	-				-3.5
3,353,936	+				+0.9
3,353,966	+				+0.1
3,353,967	-				+0.7
3,354,046	+		BT2691	0.18	-1.1
3,354,061	+		BT2691	0.20	-2.3
3,354,167	+		BT2691	0.37	-1.3
3,354,331	+		BT2691	0.63	-0.4
3,354,526	+				-0.6
3,354,526	+				-0.7
3,354,527	-				-2.0
3,354,543	-				-0.1
3,354,557	+				+0.5
3,354,566	-				+0.1
3,354,578	+				-0.9
3,354,599	+				-1.5
3,354,599	+				-3.1
3,354,600	-				-0.6
3,354,613	+				-2.1
3,354,614	-				-3.1
3,354,645	+				+1.5
3,354,646	-				-1.5
3,354,646	-				+0.1
3,354,787	+		BT2692	0.16	-0.4
3,354,798	+		BT2692	0.17	-0.6
3,354,798	+		BT2692	0.17	+1.4
3,354,802	+		BT2692	0.17	-0.4
3,354,915	+		BT2692	0.26	+2.0
3,354,956	-				+1.7
3,354,959	+		BT2692	0.30	-0.9
3,354,963	-		BT2692	0.30	-1.3
3,355,239	+		BT2692	0.52	+1.9
3,355,240	-		BT2692	0.52	-1.0
3,355,258	+		BT2692	0.54	+0.7
3,355,287	-		BT2692	0.56	-1.1
3,355,299	-		BT2692	0.57	-0.7
3,355,299	-		BT2692	0.57	-0.9
3,355,309	+		BT2692	0.58	-1.3
3,355,309	+		BT2692	0.58	-1.9
3,355,401	-		BT2692	0.65	+1.7
3,355,417	+		BT2692	0.66	-1.7
3,355,490	+		BT2692	0.72	-0.0
3,355,532	-		BT2692	0.76	+0.9
3,355,534	-		BT2692	0.76	-1.6