Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1795

Experiment: BHIS with Ceftazidime 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Ceftazidime 0.5 mg/ml
2,244,504	-				-1.5
2,244,555	+				-0.9
2,244,635	-				-2.9
2,244,696	+				-0.4
2,244,724	+				-0.6
2,244,746	+				-0.5
2,244,768	-				-0.1
2,244,770	-				-0.8
2,244,770	-				+0.7
2,244,774	-				-0.1
2,244,790	+				+0.2
2,244,809	+				-1.5
2,244,856	+		BT1794	0.18	-1.8
2,244,867	+		BT1794	0.20	+0.7
2,244,868	-		BT1794	0.20	-0.3
2,244,936	-		BT1794	0.29	-2.8
2,244,948	+		BT1794	0.31	-0.5
2,244,984	-		BT1794	0.36	+1.5
2,245,064	+		BT1794	0.47	-0.2
2,245,064	+		BT1794	0.47	+0.5
2,245,065	-		BT1794	0.47	-0.8
2,245,122	-		BT1794	0.55	-1.7
2,245,223	+		BT1794	0.69	+1.5
2,245,287	-		BT1794	0.77	-3.4
2,245,329	+		BT1794	0.83	-3.1
2,245,392	+				+0.4
2,245,395	-				-0.2
2,245,396	+				+0.1
2,245,457	+				+0.3
2,245,469	-				+0.2
2,245,515	+				-1.0
2,245,522	+				+0.7
2,245,550	+				-0.3
2,245,550	+				+0.3
2,245,553	-				-0.6
2,245,610	-		BT1795	0.13	-1.9
2,245,610	-		BT1795	0.13	-0.1
2,245,862	-		BT1795	0.34	-1.5
2,245,872	+		BT1795	0.35	-1.1
2,245,873	-		BT1795	0.35	+1.2
2,245,881	+		BT1795	0.36	-1.9
2,245,966	+		BT1795	0.43	-0.1
2,245,995	+		BT1795	0.45	-0.6
2,246,004	+		BT1795	0.46	+0.2
2,246,092	+		BT1795	0.53	-3.1
2,246,131	+		BT1795	0.56	+0.4
2,246,132	-		BT1795	0.56	-1.3
2,246,278	+		BT1795	0.69	-1.0
2,246,278	+		BT1795	0.69	-0.9
2,246,282	-		BT1795	0.69	-0.3
2,246,387	-		BT1795	0.78	-1.6
2,246,387	-		BT1795	0.78	-1.4
2,246,415	+		BT1795	0.80	-0.8
2,246,464	+		BT1795	0.84	+0.5
2,246,566	-				-1.3
2,246,613	+				-0.6
2,246,680	+				-2.8
2,246,689	-				-0.5
2,246,697	+				+1.5
2,246,716	+				+0.1
2,246,733	+				+1.1
2,246,757	+				+0.3
2,246,757	+				+1.3
2,246,848	+				+1.1
2,246,877	+				-2.1
2,246,891	-				+0.5
2,246,945	-				+2.2
2,246,947	-				+0.5
2,246,947	-				-0.4
2,246,947	-				+0.3
2,247,000	+		BT1796	0.12	-2.1
2,247,018	+		BT1796	0.13	+0.3
2,247,121	+		BT1796	0.18	-1.6
2,247,301	+		BT1796	0.27	-0.6
2,247,322	+		BT1796	0.28	-0.5
2,247,323	-		BT1796	0.28	-0.2
2,247,340	+		BT1796	0.29	-2.2
2,247,515	+		BT1796	0.38	-2.5
2,247,516	-		BT1796	0.38	-3.0
2,247,516	-		BT1796	0.38	-3.1
2,247,516	-		BT1796	0.38	-3.2
2,247,519	+		BT1796	0.38	+0.9
2,247,519	+		BT1796	0.38	+0.5
2,247,519	+		BT1796	0.38	+0.1
2,247,519	+		BT1796	0.38	+0.2
2,247,519	+		BT1796	0.38	-0.9
2,247,568	+				+1.5
2,247,568	+		BT1796	0.41	-1.8
2,247,644	-		BT1796	0.44	-1.3