Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09765

Experiment: NAG (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N); with MOPS
2,151,327	+		PFLU_RS09755	0.22	+1.1
2,151,327	+		PFLU_RS09755	0.22	+3.0
2,151,327	+		PFLU_RS09755	0.22	-1.3
2,151,327	+		PFLU_RS09755	0.22	+0.2
2,151,327	+		PFLU_RS09755	0.22	-1.2
2,151,327	+		PFLU_RS09755	0.22	-0.8
2,151,327	+		PFLU_RS09755	0.22	-2.8
2,151,328	-		PFLU_RS09755	0.23	+1.4
2,151,328	-		PFLU_RS09755	0.23	+1.8
2,151,328	-		PFLU_RS09755	0.23	+0.6
2,151,332	+		PFLU_RS09755	0.23	-2.1
2,151,333	-		PFLU_RS09755	0.23	-1.0
2,151,336	+		PFLU_RS09755	0.23	-1.7
2,151,336	+		PFLU_RS09755	0.23	-0.5
2,151,337	-		PFLU_RS09755	0.24	+1.3
2,151,429	+		PFLU_RS09755	0.35	-1.5
2,151,539	+		PFLU_RS09755	0.48	-0.3
2,151,539	+		PFLU_RS09755	0.48	-1.3
2,151,540	-		PFLU_RS09755	0.48	+1.0
2,151,593	+		PFLU_RS09755	0.54	-1.6
2,151,593	+		PFLU_RS09755	0.54	+1.5
2,151,594	-		PFLU_RS09755	0.54	+1.8
2,151,594	-		PFLU_RS09755	0.54	+1.3
2,151,690	+		PFLU_RS09755	0.65	-0.6
2,151,691	-		PFLU_RS09755	0.66	-2.1
2,151,765	+		PFLU_RS09755	0.74	-0.3
2,151,765	+		PFLU_RS09755	0.74	+1.3
2,151,765	+		PFLU_RS09755	0.74	-1.3
2,151,765	+		PFLU_RS09755	0.74	-2.3
2,151,797	+		PFLU_RS09755	0.78	-1.2
2,151,797	+		PFLU_RS09755	0.78	-1.5
2,151,797	+		PFLU_RS09755	0.78	-1.5
2,151,797	+		PFLU_RS09755	0.78	+0.7
2,151,798	-		PFLU_RS09755	0.78	+1.5
2,151,798	-		PFLU_RS09755	0.78	-0.1
2,151,798	-		PFLU_RS09755	0.78	+1.2
2,151,805	+		PFLU_RS09755	0.79	-2.6
2,151,806	-		PFLU_RS09755	0.79	-0.2
2,151,806	-		PFLU_RS09755	0.79	+0.8
2,151,838	+		PFLU_RS09755	0.83	-2.5
2,151,839	-		PFLU_RS09755	0.83	-1.6
2,151,841	+		PFLU_RS09755	0.83	+0.4
2,151,841	+		PFLU_RS09755	0.83	+0.4
2,151,841	+		PFLU_RS09755	0.83	-1.0
2,151,842	-		PFLU_RS09755	0.84	-1.6
2,151,842	-		PFLU_RS09755	0.84	-1.0
2,151,842	-		PFLU_RS09755	0.84	-0.8
2,151,927	+				+2.2
2,151,928	-				+1.7
2,151,928	-				+1.9
2,151,928	-				-1.6
2,151,942	+				-1.5
2,152,103	+		PFLU_RS09760	0.51	+2.1
2,152,103	+		PFLU_RS09760	0.51	-0.0
2,152,103	+		PFLU_RS09760	0.51	-1.7
2,152,103	+		PFLU_RS09760	0.51	-2.3
2,152,103	+		PFLU_RS09760	0.51	+0.8
2,152,103	+		PFLU_RS09760	0.51	-1.5
2,152,103	+		PFLU_RS09760	0.51	-1.6
2,152,103	+		PFLU_RS09760	0.51	-2.3
2,152,103	+		PFLU_RS09760	0.51	+2.0
2,152,104	-		PFLU_RS09760	0.52	-1.7
2,152,104	-		PFLU_RS09760	0.52	+3.0
2,152,104	-		PFLU_RS09760	0.52	-0.3
2,152,104	-		PFLU_RS09760	0.52	-0.6
2,152,104	-		PFLU_RS09760	0.52	-1.8
2,152,104	-		PFLU_RS09760	0.52	-1.8
2,152,104	-		PFLU_RS09760	0.52	-0.0
2,152,104	-		PFLU_RS09760	0.52	-1.8
2,152,138	+		PFLU_RS09760	0.66	-1.3
2,152,139	-		PFLU_RS09760	0.67	+0.4
2,152,139	-		PFLU_RS09760	0.67	+3.2
2,152,405	+		PFLU_RS09765	0.11	+1.2
2,152,413	+		PFLU_RS09765	0.12	-1.2
2,152,540	+		PFLU_RS09765	0.28	+2.0
2,152,585	+		PFLU_RS09765	0.34	-2.1
2,152,622	-		PFLU_RS09765	0.39	-1.3
2,152,624	+		PFLU_RS09765	0.40	+2.3
2,152,625	-		PFLU_RS09765	0.40	-1.2
2,152,625	-		PFLU_RS09765	0.40	+1.1
2,152,639	-		PFLU_RS09765	0.42	-2.3
2,152,643	+		PFLU_RS09765	0.42	-2.4
2,152,720	-		PFLU_RS09765	0.52	-0.3
2,152,720	-		PFLU_RS09765	0.52	+0.7
2,152,768	-		PFLU_RS09765	0.59	-1.8
2,152,805	+		PFLU_RS09765	0.63	+3.4
2,152,830	+		PFLU_RS09765	0.67	-0.3
2,152,852	+		PFLU_RS09765	0.70	-1.9
2,152,852	+		PFLU_RS09765	0.70	-0.0
2,152,871	+		PFLU_RS09765	0.72	-1.6
2,152,871	+		PFLU_RS09765	0.72	-0.6
2,152,871	+		PFLU_RS09765	0.72	-1.0
2,152,871	+		PFLU_RS09765	0.72	-2.5
2,152,872	-		PFLU_RS09765	0.72	-0.3
2,152,882	+		PFLU_RS09765	0.74	-0.3
2,152,897	-		PFLU_RS09765	0.76	+0.5
2,152,940	+		PFLU_RS09765	0.81	-2.2
2,152,940	+		PFLU_RS09765	0.81	+2.0
2,152,940	+		PFLU_RS09765	0.81	-1.2
2,152,944	+		PFLU_RS09765	0.82	-0.0
2,152,982	+		PFLU_RS09765	0.87	-2.1
2,152,983	-		PFLU_RS09765	0.87	+1.0
2,153,009	-				+2.1
2,153,040	+				-0.8
2,153,041	-				+1.8
2,153,041	-				-0.0
2,153,041	-				+2.5
2,153,081	-				+1.8
2,153,142	+				+2.4
2,153,146	+				-1.8
2,153,147	-				-0.3
2,153,153	-				+3.0
2,153,205	-				-0.8
2,153,208	-				-1.0
2,153,247	+				-0.0
2,153,248	-				-1.0
2,153,248	-				-0.6
2,153,280	-				-0.8
2,153,335	+				-2.2
2,153,336	-				-0.6
2,153,336	-				-1.7
2,153,336	-				-1.8
2,153,363	+				-0.6
2,153,363	+				-1.9
2,153,364	-				-0.8
2,153,405	+				+1.6
2,153,450	+		PFLU_RS09770	0.16	+2.3
2,153,454	+		PFLU_RS09770	0.17	+0.9
2,153,454	+		PFLU_RS09770	0.17	+2.7
2,153,454	+		PFLU_RS09770	0.17	-1.2
2,153,455	-		PFLU_RS09770	0.17	+2.2
2,153,455	-		PFLU_RS09770	0.17	+1.1
2,153,459	+		PFLU_RS09770	0.17	+1.1
2,153,460	-		PFLU_RS09770	0.17	-2.4
2,153,460	-		PFLU_RS09770	0.17	-2.1
2,153,460	-		PFLU_RS09770	0.17	+2.0
2,153,474	+		PFLU_RS09770	0.20	-1.6
2,153,483	+		PFLU_RS09770	0.21	-2.3
2,153,483	+		PFLU_RS09770	0.21	-0.8
2,153,484	-		PFLU_RS09770	0.21	+3.2
2,153,491	+		PFLU_RS09770	0.22	+1.2
2,153,492	-		PFLU_RS09770	0.22	+1.7
2,153,492	-		PFLU_RS09770	0.22	+0.4
2,153,497	-		PFLU_RS09770	0.23	+1.4
2,153,514	+		PFLU_RS09770	0.26	+2.2
2,153,514	+		PFLU_RS09770	0.26	+1.3
2,153,514	+		PFLU_RS09770	0.26	-2.6
2,153,514	+		PFLU_RS09770	0.26	+2.0
2,153,514	+		PFLU_RS09770	0.26	+0.4
2,153,514	+		PFLU_RS09770	0.26	-1.9
2,153,514	+		PFLU_RS09770	0.26	+0.1
2,153,515	-		PFLU_RS09770	0.26	-0.8
2,153,515	-		PFLU_RS09770	0.26	-1.3
2,153,592	+		PFLU_RS09770	0.38	+2.1
2,153,592	+		PFLU_RS09770	0.38	-1.5
2,153,597	+		PFLU_RS09770	0.38	-0.0
2,153,597	+		PFLU_RS09770	0.38	-1.0
2,153,598	-		PFLU_RS09770	0.39	+2.4
2,153,607	+		PFLU_RS09770	0.40	+2.1
2,153,607	+		PFLU_RS09770	0.40	-2.9
2,153,607	+		PFLU_RS09770	0.40	-2.7
2,153,607	+		PFLU_RS09770	0.40	+1.4
2,153,607	+		PFLU_RS09770	0.40	-1.0
2,153,607	+		PFLU_RS09770	0.40	+1.4
2,153,608	-		PFLU_RS09770	0.40	+0.4
2,153,608	-		PFLU_RS09770	0.40	+2.3
2,153,608	-		PFLU_RS09770	0.40	-1.3
2,153,608	-		PFLU_RS09770	0.40	+0.6
2,153,608	-		PFLU_RS09770	0.40	+0.2
2,153,608	-		PFLU_RS09770	0.40	+2.3
2,153,608	-		PFLU_RS09770	0.40	-1.0
2,153,608	-		PFLU_RS09770	0.40	+0.7
2,153,610	-		PFLU_RS09770	0.40	-1.7
2,153,653	+		PFLU_RS09770	0.47	-1.7
2,153,653	+		PFLU_RS09770	0.47	+1.0
2,153,745	-		PFLU_RS09770	0.61	-1.8
2,153,773	+		PFLU_RS09770	0.65	+1.0
2,153,837	-		PFLU_RS09770	0.75	-1.5
2,153,866	-		PFLU_RS09770	0.80	-1.3
2,153,866	-		PFLU_RS09770	0.80	-1.2
2,153,932	-		PFLU_RS09770	0.90	-1.7
2,154,000	-				+1.0
2,154,001	+				+1.2
2,154,002	-				-2.6