Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1231

Experiment: perchlorate 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	perchlorate 25 mM
1,289,137	+		Ga0059261_1230	0.45	-0.1
1,289,137	+		Ga0059261_1230	0.45	-0.1
1,289,137	+		Ga0059261_1230	0.45	+0.9
1,289,137	+		Ga0059261_1230	0.45	-0.1
1,289,137	+		Ga0059261_1230	0.45	+0.2
1,289,137	+		Ga0059261_1230	0.45	+0.9
1,289,137	+		Ga0059261_1230	0.45	+0.0
1,289,138	-		Ga0059261_1230	0.45	-0.3
1,289,138	-		Ga0059261_1230	0.45	+0.3
1,289,138	-				-0.5
1,289,138	-		Ga0059261_1230	0.45	+0.3
1,289,138	-		Ga0059261_1230	0.45	-0.6
1,289,138	-		Ga0059261_1230	0.45	+0.1
1,289,187	+		Ga0059261_1230	0.48	-0.4
1,289,187	+		Ga0059261_1230	0.48	-0.1
1,289,188	-		Ga0059261_1230	0.48	+0.7
1,289,188	-		Ga0059261_1230	0.48	+0.2
1,289,188	-		Ga0059261_1230	0.48	-0.4
1,289,292	-		Ga0059261_1230	0.54	+0.3
1,289,312	-		Ga0059261_1230	0.55	-0.0
1,289,312	-				+1.1
1,289,687	+		Ga0059261_1230	0.77	+0.1
1,289,687	+		Ga0059261_1230	0.77	+0.2
1,289,687	+		Ga0059261_1230	0.77	+0.6
1,289,688	-		Ga0059261_1230	0.77	+0.8
1,289,688	-		Ga0059261_1230	0.77	-0.1
1,289,773	+		Ga0059261_1230	0.82	+0.1
1,289,774	-		Ga0059261_1230	0.82	+0.4
1,289,774	-		Ga0059261_1230	0.82	+0.4
1,289,774	-		Ga0059261_1230	0.82	+0.2
1,289,776	+		Ga0059261_1230	0.82	-0.4
1,289,776	+		Ga0059261_1230	0.82	-0.4
1,289,776	+		Ga0059261_1230	0.82	-0.2
1,289,777	-		Ga0059261_1230	0.82	+1.1
1,289,777	-		Ga0059261_1230	0.82	-1.1
1,289,777	-		Ga0059261_1230	0.82	+0.3
1,289,777	-		Ga0059261_1230	0.82	-0.2
1,289,959	+				+0.1
1,289,959	+				-0.8
1,289,960	-				+0.1
1,289,960	-				-2.3
1,289,966	+				-0.7
1,289,966	+				-0.3
1,289,967	-				+1.1
1,289,967	-				+0.1
1,290,004	-				+0.2
1,290,046	+				-0.4
1,290,046	+				-0.2
1,290,046	+				-0.8
1,290,046	+				-0.3
1,290,046	+				-0.2
1,290,046	+				+0.5
1,290,046	+				+0.7
1,290,046	+				-0.4
1,290,047	-				+0.8
1,290,047	-				+0.4
1,290,047	-				+0.8
1,290,047	-				+0.2
1,290,047	-				+0.4
1,290,047	-				+0.1
1,290,047	-				+0.1
1,290,047	-				-0.5
1,290,104	+				-0.8
1,290,104	+				+0.4
1,290,104	+				-1.6
1,290,104	+				-0.3
1,290,104	+				-0.0
1,290,105	-				+0.2
1,290,105	-				-0.3
1,290,105	-				+0.1
1,290,105	-				-0.2
1,290,366	+		Ga0059261_1231	0.55	-1.2
1,290,366	+		Ga0059261_1231	0.55	+0.1
1,290,366	+		Ga0059261_1231	0.55	+0.5
1,290,366	+		Ga0059261_1231	0.55	-0.1
1,290,366	+		Ga0059261_1231	0.55	-0.5
1,290,366	+		Ga0059261_1231	0.55	-1.3
1,290,366	+		Ga0059261_1231	0.55	-0.3
1,290,366	+		Ga0059261_1231	0.55	+0.3
1,290,366	+		Ga0059261_1231	0.55	-0.2
1,290,366	+		Ga0059261_1231	0.55	-0.4
1,290,366	+		Ga0059261_1231	0.55	+0.1
1,290,366	+		Ga0059261_1231	0.55	+0.2
1,290,366	+		Ga0059261_1231	0.55	-0.8
1,290,366	+		Ga0059261_1231	0.55	-0.3
1,290,366	+		Ga0059261_1231	0.55	+0.1
1,290,366	+		Ga0059261_1231	0.55	+0.2
1,290,366	+		Ga0059261_1231	0.55	+0.1
1,290,366	+		Ga0059261_1231	0.55	-0.1
1,290,366	+		Ga0059261_1231	0.55	+0.6
1,290,366	+		Ga0059261_1231	0.55	+1.1
1,290,366	+		Ga0059261_1231	0.55	-0.3
1,290,366	+		Ga0059261_1231	0.55	-0.5
1,290,366	+		Ga0059261_1231	0.55	-0.5
1,290,366	+		Ga0059261_1231	0.55	-0.3
1,290,367	-		Ga0059261_1231	0.56	+0.3
1,290,367	-				-0.2
1,290,367	-		Ga0059261_1231	0.56	-0.2
1,290,367	-		Ga0059261_1231	0.56	-0.8
1,290,367	-		Ga0059261_1231	0.56	+0.4
1,290,367	-		Ga0059261_1231	0.56	-1.3
1,290,367	-		Ga0059261_1231	0.56	-0.3
1,290,367	-		Ga0059261_1231	0.56	-0.4
1,290,367	-		Ga0059261_1231	0.56	-0.9
1,290,367	-		Ga0059261_1231	0.56	-0.8
1,290,367	-		Ga0059261_1231	0.56	+0.5
1,290,367	-		Ga0059261_1231	0.56	+0.3
1,290,367	-		Ga0059261_1231	0.56	-0.1
1,290,367	-		Ga0059261_1231	0.56	-1.5
1,290,367	-		Ga0059261_1231	0.56	-0.9
1,290,367	-		Ga0059261_1231	0.56	+0.0
1,290,367	-		Ga0059261_1231	0.56	-1.5
1,290,367	-		Ga0059261_1231	0.56	+0.8
1,290,367	-		Ga0059261_1231	0.56	-0.5
1,290,367	-		Ga0059261_1231	0.56	-1.3
1,290,367	-		Ga0059261_1231	0.56	-0.9
1,290,367	-		Ga0059261_1231	0.56	+0.4
1,290,367	-		Ga0059261_1231	0.56	-0.5
1,290,367	-		Ga0059261_1231	0.56	-0.2
1,290,370	+		Ga0059261_1231	0.56	-0.3
1,290,370	+		Ga0059261_1231	0.56	+0.1
1,290,370	+		Ga0059261_1231	0.56	+0.8
1,290,370	+		Ga0059261_1231	0.56	+2.3
1,290,370	+		Ga0059261_1231	0.56	-0.4
1,290,370	+		Ga0059261_1231	0.56	+0.4
1,290,370	+		Ga0059261_1231	0.56	+0.3
1,290,370	+		Ga0059261_1231	0.56	-0.7
1,290,371	-		Ga0059261_1231	0.56	-0.4
1,290,371	-		Ga0059261_1231	0.56	-1.2
1,290,371	-		Ga0059261_1231	0.56	+0.4
1,290,371	-		Ga0059261_1231	0.56	-0.2
1,290,371	-		Ga0059261_1231	0.56	-0.3
1,290,492	+		Ga0059261_1231	0.83	+0.3
1,290,492	+		Ga0059261_1231	0.83	+0.2
1,290,493	-		Ga0059261_1231	0.83	-0.4
1,290,493	-		Ga0059261_1231	0.83	-0.6
1,290,493	-		Ga0059261_1231	0.83	+0.3
1,290,493	-		Ga0059261_1231	0.83	-0.3
1,290,690	+				+0.1
1,290,708	+				+0.4
1,290,708	+				+0.7
1,290,708	+				-0.6
1,290,708	+				+0.1
1,290,709	-				-1.0
1,290,709	-				+0.3
1,290,709	-				-0.1
1,290,709	-				-0.1
1,290,709	-				+0.3
1,290,752	+				-1.3
1,290,753	-				+1.3
1,290,934	-		Ga0059261_1232	0.15	-1.9
1,290,934	-		Ga0059261_1232	0.15	-0.3
1,290,939	+		Ga0059261_1232	0.15	-0.1
1,290,939	+		Ga0059261_1232	0.15	-2.3
1,291,005	-		Ga0059261_1232	0.18	+0.8
1,291,005	-		Ga0059261_1232	0.18	-0.1
1,291,080	+		Ga0059261_1232	0.22	+0.1
1,291,080	+		Ga0059261_1232	0.22	-1.2
1,291,167	+		Ga0059261_1232	0.25	+3.9
1,291,168	-		Ga0059261_1232	0.25	-0.5
1,291,237	-		Ga0059261_1232	0.28	+0.6
1,291,280	+		Ga0059261_1232	0.30	-1.1
1,291,280	+		Ga0059261_1232	0.30	-0.1
1,291,280	+		Ga0059261_1232	0.30	+0.3
1,291,281	-		Ga0059261_1232	0.30	-0.5
1,291,281	-		Ga0059261_1232	0.30	+0.4
1,291,301	+		Ga0059261_1232	0.31	-0.3
1,291,301	+		Ga0059261_1232	0.31	+0.8
1,291,302	-		Ga0059261_1232	0.31	-0.5
1,291,302	-		Ga0059261_1232	0.31	-0.2
1,291,302	-		Ga0059261_1232	0.31	+1.1
1,291,302	-		Ga0059261_1232	0.31	-0.1
1,291,448	+		Ga0059261_1232	0.38	-0.8
1,291,448	+		Ga0059261_1232	0.38	+0.2
1,291,448	+		Ga0059261_1232	0.38	-0.4
1,291,448	+		Ga0059261_1232	0.38	+0.6
1,291,448	+		Ga0059261_1232	0.38	-0.3
1,291,448	+		Ga0059261_1232	0.38	-0.1
1,291,448	+				+0.1
1,291,449	-		Ga0059261_1232	0.38	-0.3
1,291,449	-		Ga0059261_1232	0.38	+0.4
1,291,449	-		Ga0059261_1232	0.38	-0.0