Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2979 and Dshi_2980 overlap by 4 nucleotides Dshi_2980 and Dshi_2981 are separated by 175 nucleotides Dshi_2981 and Dshi_2982 are separated by 74 nucleotides Dshi_2982 and Dshi_2983 are separated by 63 nucleotides
Dshi_2979: Dshi_2979 - Adenosylcobinamide-phosphateguanylyltransferase (RefSeq), at 3,146,213 to 3,146,737
_2979
Dshi_2980: Dshi_2980 - Phosphoglycerate mutase (RefSeq), at 3,146,734 to 3,147,306
_2980
Dshi_2981: Dshi_2981 - Sulfite oxidase (RefSeq), at 3,147,482 to 3,148,744
_2981
Dshi_2982: Dshi_2982 - hypothetical protein (RefSeq), at 3,148,819 to 3,149,169
_2982
Dshi_2983: Dshi_2983 - Alcohol dehydrogenase zinc-binding domain protein (RefSeq), at 3,149,233 to 3,150,231
_2983
Position (kb)
3147
3148
3149 Strain fitness (log2 ratio)
-1
0
1 at 3146.740 kb on - strand at 3146.744 kb on - strand at 3146.751 kb on - strand at 3147.381 kb on + strand at 3147.507 kb on - strand at 3147.578 kb on - strand at 3147.578 kb on - strand at 3147.583 kb on - strand at 3147.753 kb on - strand, within Dshi_2981 at 3147.828 kb on - strand, within Dshi_2981 at 3147.899 kb on + strand, within Dshi_2981 at 3147.907 kb on - strand, within Dshi_2981 at 3147.914 kb on - strand, within Dshi_2981 at 3148.054 kb on + strand, within Dshi_2981 at 3148.063 kb on + strand, within Dshi_2981 at 3148.184 kb on - strand, within Dshi_2981 at 3148.327 kb on + strand, within Dshi_2981 at 3148.327 kb on + strand, within Dshi_2981 at 3148.327 kb on + strand, within Dshi_2981 at 3148.327 kb on + strand, within Dshi_2981 at 3148.335 kb on - strand, within Dshi_2981 at 3148.396 kb on - strand, within Dshi_2981 at 3148.397 kb on + strand, within Dshi_2981 at 3148.448 kb on - strand, within Dshi_2981 at 3148.473 kb on + strand, within Dshi_2981 at 3148.581 kb on + strand, within Dshi_2981 at 3148.608 kb on - strand, within Dshi_2981 at 3148.713 kb on - strand at 3148.722 kb on + strand at 3148.751 kb on - strand at 3148.751 kb on - strand at 3148.772 kb on - strand at 3148.782 kb on - strand at 3148.882 kb on + strand, within Dshi_2982 at 3148.882 kb on + strand, within Dshi_2982 at 3149.019 kb on + strand, within Dshi_2982 at 3149.147 kb on + strand at 3149.158 kb on + strand at 3149.171 kb on - strand at 3149.218 kb on + strand at 3149.226 kb on - strand at 3149.310 kb on - strand at 3149.361 kb on - strand, within Dshi_2983 at 3149.427 kb on + strand, within Dshi_2983 at 3149.466 kb on + strand, within Dshi_2983 at 3149.535 kb on - strand, within Dshi_2983 at 3149.554 kb on + strand, within Dshi_2983 at 3149.584 kb on + strand, within Dshi_2983 at 3149.652 kb on - strand, within Dshi_2983 at 3149.659 kb on + strand, within Dshi_2983
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,146,740 - -0.6 3,146,744 - +0.2 3,146,751 - +0.2 3,147,381 + +0.5 3,147,507 - -0.2 3,147,578 - -0.1 3,147,578 - -1.6 3,147,583 - +0.3 3,147,753 - Dshi_2981 0.21 -0.1 3,147,828 - Dshi_2981 0.27 +0.2 3,147,899 + Dshi_2981 0.33 +0.7 3,147,907 - Dshi_2981 0.34 +1.0 3,147,914 - Dshi_2981 0.34 +0.4 3,148,054 + Dshi_2981 0.45 +0.1 3,148,063 + Dshi_2981 0.46 +1.7 3,148,184 - Dshi_2981 0.56 -0.0 3,148,327 + Dshi_2981 0.67 +1.4 3,148,327 + Dshi_2981 0.67 -0.6 3,148,327 + Dshi_2981 0.67 +0.3 3,148,327 + Dshi_2981 0.67 -0.6 3,148,335 - Dshi_2981 0.68 +0.5 3,148,396 - Dshi_2981 0.72 -0.7 3,148,397 + Dshi_2981 0.72 +1.0 3,148,448 - Dshi_2981 0.76 -0.4 3,148,473 + Dshi_2981 0.78 -1.1 3,148,581 + Dshi_2981 0.87 -1.3 3,148,608 - Dshi_2981 0.89 +1.0 3,148,713 - +0.0 3,148,722 + -0.0 3,148,751 - -0.0 3,148,751 - +1.6 3,148,772 - +0.8 3,148,782 - +1.0 3,148,882 + Dshi_2982 0.18 -1.3 3,148,882 + Dshi_2982 0.18 +1.2 3,149,019 + Dshi_2982 0.57 +0.8 3,149,147 + +0.3 3,149,158 + +0.4 3,149,171 - -0.7 3,149,218 + +0.3 3,149,226 - -1.0 3,149,310 - +0.2 3,149,361 - Dshi_2983 0.13 +0.3 3,149,427 + Dshi_2983 0.19 -1.2 3,149,466 + Dshi_2983 0.23 -0.3 3,149,535 - Dshi_2983 0.30 +0.5 3,149,554 + Dshi_2983 0.32 -0.8 3,149,584 + Dshi_2983 0.35 -0.0 3,149,652 - Dshi_2983 0.42 +0.5 3,149,659 + Dshi_2983 0.43 -0.0
Or see this region's nucleotide sequence