Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2978 and Dshi_2979 are separated by 117 nucleotides Dshi_2979 and Dshi_2980 overlap by 4 nucleotides Dshi_2980 and Dshi_2981 are separated by 175 nucleotides
Dshi_2978: Dshi_2978 - RNA polymerase, sigma 32 subunit, RpoH (RefSeq), at 3,145,214 to 3,146,095
_2978
Dshi_2979: Dshi_2979 - Adenosylcobinamide-phosphateguanylyltransferase (RefSeq), at 3,146,213 to 3,146,737
_2979
Dshi_2980: Dshi_2980 - Phosphoglycerate mutase (RefSeq), at 3,146,734 to 3,147,306
_2980
Dshi_2981: Dshi_2981 - Sulfite oxidase (RefSeq), at 3,147,482 to 3,148,744
_2981
Position (kb)
3146
3147
3148 Strain fitness (log2 ratio)
-2
-1
0
1 at 3145.738 kb on - strand, within Dshi_2978 at 3145.739 kb on + strand, within Dshi_2978 at 3145.780 kb on - strand, within Dshi_2978 at 3145.801 kb on - strand, within Dshi_2978 at 3145.807 kb on + strand, within Dshi_2978 at 3145.851 kb on + strand, within Dshi_2978 at 3145.859 kb on - strand, within Dshi_2978 at 3145.859 kb on - strand, within Dshi_2978 at 3145.862 kb on + strand, within Dshi_2978 at 3145.862 kb on + strand, within Dshi_2978 at 3145.862 kb on + strand, within Dshi_2978 at 3145.862 kb on + strand, within Dshi_2978 at 3145.864 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.870 kb on - strand, within Dshi_2978 at 3145.884 kb on + strand, within Dshi_2978 at 3145.955 kb on + strand, within Dshi_2978 at 3145.967 kb on - strand, within Dshi_2978 at 3145.972 kb on - strand, within Dshi_2978 at 3145.972 kb on - strand, within Dshi_2978 at 3145.972 kb on - strand, within Dshi_2978 at 3145.997 kb on + strand, within Dshi_2978 at 3145.998 kb on + strand, within Dshi_2978 at 3146.000 kb on - strand, within Dshi_2978 at 3146.002 kb on + strand, within Dshi_2978 at 3146.003 kb on + strand, within Dshi_2978 at 3146.005 kb on - strand, within Dshi_2978 at 3146.005 kb on - strand, within Dshi_2978 at 3146.006 kb on - strand, within Dshi_2978 at 3146.009 kb on + strand at 3146.012 kb on + strand at 3146.074 kb on - strand at 3146.095 kb on + strand at 3146.112 kb on - strand at 3146.137 kb on + strand at 3146.141 kb on + strand at 3146.144 kb on - strand at 3146.164 kb on - strand at 3146.740 kb on - strand at 3146.744 kb on - strand at 3146.751 kb on - strand at 3147.381 kb on + strand at 3147.507 kb on - strand at 3147.578 kb on - strand at 3147.578 kb on - strand at 3147.583 kb on - strand at 3147.753 kb on - strand, within Dshi_2981 at 3147.828 kb on - strand, within Dshi_2981 at 3147.899 kb on + strand, within Dshi_2981 at 3147.907 kb on - strand, within Dshi_2981 at 3147.914 kb on - strand, within Dshi_2981 at 3148.054 kb on + strand, within Dshi_2981 at 3148.063 kb on + strand, within Dshi_2981 at 3148.184 kb on - strand, within Dshi_2981
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,145,738 - Dshi_2978 0.59 -0.4 3,145,739 + Dshi_2978 0.60 -0.0 3,145,780 - Dshi_2978 0.64 +0.4 3,145,801 - Dshi_2978 0.67 -0.4 3,145,807 + Dshi_2978 0.67 -2.6 3,145,851 + Dshi_2978 0.72 -0.7 3,145,859 - Dshi_2978 0.73 -0.1 3,145,859 - Dshi_2978 0.73 +1.0 3,145,862 + Dshi_2978 0.73 +0.3 3,145,862 + Dshi_2978 0.73 -0.0 3,145,862 + Dshi_2978 0.73 +1.0 3,145,862 + Dshi_2978 0.73 -0.4 3,145,864 - Dshi_2978 0.74 -0.2 3,145,870 - Dshi_2978 0.74 -0.0 3,145,870 - Dshi_2978 0.74 -0.8 3,145,870 - Dshi_2978 0.74 -1.0 3,145,870 - Dshi_2978 0.74 -0.5 3,145,870 - Dshi_2978 0.74 +1.0 3,145,870 - Dshi_2978 0.74 -1.0 3,145,870 - Dshi_2978 0.74 -0.2 3,145,870 - Dshi_2978 0.74 -0.5 3,145,884 + Dshi_2978 0.76 -0.1 3,145,955 + Dshi_2978 0.84 +0.1 3,145,967 - Dshi_2978 0.85 +0.0 3,145,972 - Dshi_2978 0.86 +0.6 3,145,972 - Dshi_2978 0.86 -0.4 3,145,972 - Dshi_2978 0.86 +0.6 3,145,997 + Dshi_2978 0.89 -0.7 3,145,998 + Dshi_2978 0.89 +0.2 3,146,000 - Dshi_2978 0.89 -0.7 3,146,002 + Dshi_2978 0.89 -0.2 3,146,003 + Dshi_2978 0.89 -0.5 3,146,005 - Dshi_2978 0.90 -0.1 3,146,005 - Dshi_2978 0.90 -0.7 3,146,006 - Dshi_2978 0.90 -1.0 3,146,009 + -0.3 3,146,012 + -0.2 3,146,074 - -0.6 3,146,095 + +0.7 3,146,112 - -1.0 3,146,137 + -0.3 3,146,141 + -0.3 3,146,144 - -0.3 3,146,164 - -2.3 3,146,740 - -0.6 3,146,744 - +0.2 3,146,751 - +0.2 3,147,381 + +0.5 3,147,507 - -0.2 3,147,578 - -0.1 3,147,578 - -1.6 3,147,583 - +0.3 3,147,753 - Dshi_2981 0.21 -0.1 3,147,828 - Dshi_2981 0.27 +0.2 3,147,899 + Dshi_2981 0.33 +0.7 3,147,907 - Dshi_2981 0.34 +1.0 3,147,914 - Dshi_2981 0.34 +0.4 3,148,054 + Dshi_2981 0.45 +0.1 3,148,063 + Dshi_2981 0.46 +1.7 3,148,184 - Dshi_2981 0.56 -0.0
Or see this region's nucleotide sequence