Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2174 and Dshi_2175 overlap by 4 nucleotides Dshi_2175 and Dshi_2176 are separated by 12 nucleotides Dshi_2176 and Dshi_2177 overlap by 10 nucleotides
Dshi_2174: Dshi_2174 - phage major capsid protein, HK97 family (RefSeq), at 2,301,398 to 2,302,615
_2174
Dshi_2175: Dshi_2175 - phage prohead protease, HK97 family (RefSeq), at 2,302,612 to 2,303,229
_2175
Dshi_2176: Dshi_2176 - hypothetical protein (RefSeq), at 2,303,242 to 2,303,508
_2176
Dshi_2177: Dshi_2177 - phage portal protein, HK97 family (RefSeq), at 2,303,499 to 2,304,689
_2177
Position (kb)
2302
2303
2304 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2301.619 kb on - strand, within Dshi_2174 at 2301.634 kb on - strand, within Dshi_2174 at 2301.698 kb on - strand, within Dshi_2174 at 2301.725 kb on - strand, within Dshi_2174 at 2301.768 kb on + strand, within Dshi_2174 at 2301.817 kb on - strand, within Dshi_2174 at 2301.850 kb on - strand, within Dshi_2174 at 2301.854 kb on - strand, within Dshi_2174 at 2301.896 kb on + strand, within Dshi_2174 at 2301.898 kb on - strand, within Dshi_2174 at 2302.000 kb on - strand, within Dshi_2174 at 2302.034 kb on - strand, within Dshi_2174 at 2302.034 kb on - strand, within Dshi_2174 at 2302.091 kb on - strand, within Dshi_2174 at 2302.153 kb on + strand, within Dshi_2174 at 2302.161 kb on - strand, within Dshi_2174 at 2302.233 kb on + strand, within Dshi_2174 at 2302.241 kb on + strand, within Dshi_2174 at 2302.314 kb on - strand, within Dshi_2174 at 2302.389 kb on + strand, within Dshi_2174 at 2302.434 kb on + strand, within Dshi_2174 at 2302.442 kb on - strand, within Dshi_2174 at 2302.442 kb on - strand, within Dshi_2174 at 2302.442 kb on - strand, within Dshi_2174 at 2302.484 kb on + strand, within Dshi_2174 at 2302.492 kb on - strand, within Dshi_2174 at 2302.492 kb on - strand, within Dshi_2174 at 2302.527 kb on - strand at 2302.599 kb on - strand at 2302.651 kb on - strand at 2302.670 kb on - strand at 2302.673 kb on + strand at 2302.777 kb on - strand, within Dshi_2175 at 2302.943 kb on + strand, within Dshi_2175 at 2302.981 kb on + strand, within Dshi_2175 at 2302.986 kb on + strand, within Dshi_2175 at 2303.106 kb on + strand, within Dshi_2175 at 2303.114 kb on - strand, within Dshi_2175 at 2303.118 kb on - strand, within Dshi_2175 at 2303.160 kb on - strand, within Dshi_2175 at 2303.195 kb on + strand at 2303.293 kb on - strand, within Dshi_2176 at 2303.439 kb on - strand, within Dshi_2176 at 2303.477 kb on + strand, within Dshi_2176 at 2303.498 kb on + strand at 2303.498 kb on + strand at 2303.549 kb on - strand at 2303.588 kb on - strand at 2303.618 kb on - strand, within Dshi_2177 at 2303.669 kb on + strand, within Dshi_2177 at 2303.706 kb on + strand, within Dshi_2177 at 2303.721 kb on - strand, within Dshi_2177 at 2303.831 kb on + strand, within Dshi_2177 at 2303.890 kb on + strand, within Dshi_2177 at 2303.973 kb on - strand, within Dshi_2177 at 2304.053 kb on - strand, within Dshi_2177 at 2304.064 kb on - strand, within Dshi_2177 at 2304.151 kb on - strand, within Dshi_2177 at 2304.206 kb on - strand, within Dshi_2177 at 2304.214 kb on + strand, within Dshi_2177 at 2304.221 kb on + strand, within Dshi_2177 at 2304.229 kb on - strand, within Dshi_2177
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,301,619 - Dshi_2174 0.18 -1.5 2,301,634 - Dshi_2174 0.19 +1.0 2,301,698 - Dshi_2174 0.25 -1.6 2,301,725 - Dshi_2174 0.27 +0.0 2,301,768 + Dshi_2174 0.30 -0.0 2,301,817 - Dshi_2174 0.34 +0.2 2,301,850 - Dshi_2174 0.37 +0.7 2,301,854 - Dshi_2174 0.37 -0.0 2,301,896 + Dshi_2174 0.41 -0.6 2,301,898 - Dshi_2174 0.41 +0.2 2,302,000 - Dshi_2174 0.49 -0.8 2,302,034 - Dshi_2174 0.52 +1.3 2,302,034 - Dshi_2174 0.52 -0.4 2,302,091 - Dshi_2174 0.57 -1.0 2,302,153 + Dshi_2174 0.62 -0.6 2,302,161 - Dshi_2174 0.63 -0.3 2,302,233 + Dshi_2174 0.69 -0.5 2,302,241 + Dshi_2174 0.69 +0.1 2,302,314 - Dshi_2174 0.75 -0.4 2,302,389 + Dshi_2174 0.81 -0.5 2,302,434 + Dshi_2174 0.85 -0.5 2,302,442 - Dshi_2174 0.86 -0.3 2,302,442 - Dshi_2174 0.86 +1.0 2,302,442 - Dshi_2174 0.86 -0.4 2,302,484 + Dshi_2174 0.89 +0.1 2,302,492 - Dshi_2174 0.90 +0.3 2,302,492 - Dshi_2174 0.90 +2.0 2,302,527 - +0.4 2,302,599 - +0.4 2,302,651 - -0.3 2,302,670 - +1.0 2,302,673 + -0.2 2,302,777 - Dshi_2175 0.27 -0.3 2,302,943 + Dshi_2175 0.54 +0.7 2,302,981 + Dshi_2175 0.60 -0.0 2,302,986 + Dshi_2175 0.61 +0.5 2,303,106 + Dshi_2175 0.80 -0.4 2,303,114 - Dshi_2175 0.81 +0.3 2,303,118 - Dshi_2175 0.82 +0.5 2,303,160 - Dshi_2175 0.89 +0.6 2,303,195 + +1.0 2,303,293 - Dshi_2176 0.19 +1.0 2,303,439 - Dshi_2176 0.74 -0.3 2,303,477 + Dshi_2176 0.88 -0.1 2,303,498 + +1.2 2,303,498 + -1.4 2,303,549 - -0.2 2,303,588 - +1.3 2,303,618 - Dshi_2177 0.10 -1.5 2,303,669 + Dshi_2177 0.14 +0.8 2,303,706 + Dshi_2177 0.17 +0.4 2,303,721 - Dshi_2177 0.19 -0.0 2,303,831 + Dshi_2177 0.28 -2.0 2,303,890 + Dshi_2177 0.33 +0.8 2,303,973 - Dshi_2177 0.40 -0.6 2,304,053 - Dshi_2177 0.47 -1.0 2,304,064 - Dshi_2177 0.47 +1.0 2,304,151 - Dshi_2177 0.55 -0.6 2,304,206 - Dshi_2177 0.59 -0.7 2,304,214 + Dshi_2177 0.60 -0.7 2,304,221 + Dshi_2177 0.61 -0.2 2,304,229 - Dshi_2177 0.61 +1.4
Or see this region's nucleotide sequence