Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1815 and Dshi_1816 are separated by 87 nucleotides Dshi_1816 and Dshi_1817 are separated by 222 nucleotides
Dshi_1815: Dshi_1815 - transcriptional regulator, LuxR family (RefSeq), at 1,893,248 to 1,894,045
_1815
Dshi_1816: Dshi_1816 - MscS Mechanosensitive ion channel (RefSeq), at 1,894,133 to 1,895,479
_1816
Dshi_1817: Dshi_1817 - Pirin domain protein (RefSeq), at 1,895,702 to 1,896,640
_1817
Position (kb)
1894
1895
1896 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1893.143 kb on - strand at 1893.247 kb on - strand at 1893.270 kb on + strand at 1893.331 kb on - strand, within Dshi_1815 at 1893.333 kb on - strand, within Dshi_1815 at 1893.365 kb on + strand, within Dshi_1815 at 1893.498 kb on - strand, within Dshi_1815 at 1893.549 kb on - strand, within Dshi_1815 at 1893.732 kb on + strand, within Dshi_1815 at 1893.776 kb on + strand, within Dshi_1815 at 1893.961 kb on - strand, within Dshi_1815 at 1893.974 kb on - strand at 1894.055 kb on + strand at 1894.168 kb on + strand at 1894.203 kb on - strand at 1894.248 kb on - strand at 1894.253 kb on - strand at 1894.302 kb on - strand, within Dshi_1816 at 1894.302 kb on - strand, within Dshi_1816 at 1894.335 kb on - strand, within Dshi_1816 at 1894.401 kb on - strand, within Dshi_1816 at 1894.543 kb on - strand, within Dshi_1816 at 1894.585 kb on - strand, within Dshi_1816 at 1894.659 kb on + strand, within Dshi_1816 at 1894.687 kb on + strand, within Dshi_1816 at 1894.921 kb on - strand, within Dshi_1816 at 1894.982 kb on - strand, within Dshi_1816 at 1895.108 kb on + strand, within Dshi_1816 at 1895.116 kb on - strand, within Dshi_1816 at 1895.272 kb on + strand, within Dshi_1816 at 1895.454 kb on + strand at 1895.496 kb on + strand at 1895.614 kb on + strand at 1895.672 kb on + strand at 1895.844 kb on - strand, within Dshi_1817 at 1895.862 kb on - strand, within Dshi_1817 at 1895.876 kb on - strand, within Dshi_1817 at 1895.984 kb on + strand, within Dshi_1817 at 1896.063 kb on + strand, within Dshi_1817 at 1896.066 kb on - strand, within Dshi_1817 at 1896.081 kb on - strand, within Dshi_1817 at 1896.103 kb on + strand, within Dshi_1817 at 1896.218 kb on - strand, within Dshi_1817 at 1896.218 kb on - strand, within Dshi_1817 at 1896.301 kb on - strand, within Dshi_1817
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,893,143 - -0.5 1,893,247 - -0.6 1,893,270 + +0.5 1,893,331 - Dshi_1815 0.10 -0.2 1,893,333 - Dshi_1815 0.11 -1.5 1,893,365 + Dshi_1815 0.15 -1.4 1,893,498 - Dshi_1815 0.31 -0.1 1,893,549 - Dshi_1815 0.38 -0.3 1,893,732 + Dshi_1815 0.61 -1.1 1,893,776 + Dshi_1815 0.66 -0.2 1,893,961 - Dshi_1815 0.89 +0.2 1,893,974 - +0.0 1,894,055 + -0.6 1,894,168 + +1.8 1,894,203 - +0.9 1,894,248 - -0.5 1,894,253 - -0.7 1,894,302 - Dshi_1816 0.13 -0.1 1,894,302 - Dshi_1816 0.13 -1.7 1,894,335 - Dshi_1816 0.15 -0.3 1,894,401 - Dshi_1816 0.20 +0.5 1,894,543 - Dshi_1816 0.30 +0.5 1,894,585 - Dshi_1816 0.34 +0.2 1,894,659 + Dshi_1816 0.39 +1.9 1,894,687 + Dshi_1816 0.41 -0.2 1,894,921 - Dshi_1816 0.59 -0.0 1,894,982 - Dshi_1816 0.63 +1.7 1,895,108 + Dshi_1816 0.72 +0.9 1,895,116 - Dshi_1816 0.73 -0.5 1,895,272 + Dshi_1816 0.85 +1.5 1,895,454 + -0.3 1,895,496 + -0.9 1,895,614 + -0.3 1,895,672 + -0.6 1,895,844 - Dshi_1817 0.15 -0.1 1,895,862 - Dshi_1817 0.17 -0.4 1,895,876 - Dshi_1817 0.19 -1.0 1,895,984 + Dshi_1817 0.30 -0.1 1,896,063 + Dshi_1817 0.38 -1.4 1,896,066 - Dshi_1817 0.39 -0.7 1,896,081 - Dshi_1817 0.40 +0.4 1,896,103 + Dshi_1817 0.43 -1.9 1,896,218 - Dshi_1817 0.55 -1.7 1,896,218 - Dshi_1817 0.55 +1.5 1,896,301 - Dshi_1817 0.64 -1.4
Or see this region's nucleotide sequence