Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1288
Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cisplatin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,340,351 | - | Dshi_1287 | 0.43 | -0.8 | |
1,340,740 | - | Dshi_1287 | 0.79 | -1.6 | |
1,340,892 | + | +1.1 | |||
1,340,931 | - | -0.1 | |||
1,340,945 | + | -0.3 | |||
1,340,964 | + | -0.0 | |||
1,341,052 | + | -0.5 | |||
1,341,240 | + | -0.0 | |||
1,341,500 | + | Dshi_1288 | 0.16 | +0.4 | |
1,341,523 | - | Dshi_1288 | 0.18 | +0.2 | |
1,341,603 | - | Dshi_1288 | 0.25 | +1.0 | |
1,341,964 | + | Dshi_1288 | 0.56 | -0.4 | |
1,341,989 | + | Dshi_1288 | 0.58 | -0.5 | |
1,342,164 | + | Dshi_1288 | 0.73 | +0.2 | |
1,342,208 | - | Dshi_1288 | 0.77 | -0.7 | |
1,342,298 | + | Dshi_1288 | 0.84 | -0.8 | |
1,342,443 | + | +0.4 | |||
1,343,019 | - | Dshi_1289 | 0.66 | -0.5 | |
1,343,019 | - | Dshi_1289 | 0.66 | +0.2 | |
1,343,126 | + | Dshi_1289 | 0.81 | +0.8 | |
1,343,263 | + | -0.2 |
Or see this region's nucleotide sequence