Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1260
Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cisplatin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,307,064 | - | Dshi_1259 | 0.79 | -0.9 | |
1,307,131 | + | Dshi_1259 | 0.81 | -0.7 | |
1,307,223 | + | Dshi_1259 | 0.85 | +0.1 | |
1,307,252 | + | Dshi_1259 | 0.86 | -1.6 | |
1,307,322 | - | Dshi_1259 | 0.89 | -0.3 | |
1,307,353 | + | -0.6 | |||
1,307,409 | + | -0.4 | |||
1,307,653 | - | Dshi_1260 | 0.12 | +0.2 | |
1,307,780 | - | Dshi_1260 | 0.44 | -0.2 | |
1,307,781 | + | Dshi_1260 | 0.44 | +1.1 | |
1,308,051 | - | -0.3 | |||
1,308,070 | - | -0.5 | |||
1,308,128 | + | -0.6 | |||
1,308,133 | + | +1.0 | |||
1,308,209 | - | +1.0 | |||
1,308,270 | - | Dshi_1261 | 0.15 | -0.3 | |
1,308,303 | + | Dshi_1261 | 0.17 | +1.0 | |
1,308,418 | + | Dshi_1261 | 0.27 | +0.4 | |
1,308,666 | + | Dshi_1261 | 0.47 | -1.2 | |
1,308,676 | - | Dshi_1261 | 0.48 | -0.7 | |
1,308,857 | + | Dshi_1261 | 0.63 | -0.0 | |
1,308,902 | + | Dshi_1261 | 0.67 | -2.4 |
Or see this region's nucleotide sequence