Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1235 and Dshi_1236 overlap by 37 nucleotides Dshi_1236 and Dshi_1237 are separated by 3 nucleotides Dshi_1237 and Dshi_1238 are separated by 82 nucleotides
Dshi_1235: Dshi_1235 - xylulokinase (RefSeq), at 1,279,366 to 1,280,808
_1235
Dshi_1236: Dshi_1236 - DMSO reductase anchor subunit (DmsC) (RefSeq), at 1,280,772 to 1,281,659
_1236
Dshi_1237: Dshi_1237 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,281,663 to 1,282,409
_1237
Dshi_1238: Dshi_1238 - molybdopterin oxidoreductase Fe4S4 region (RefSeq), at 1,282,492 to 1,285,278
_1238
Position (kb)
1280
1281
1282 Strain fitness (log2 ratio)
-1
0
1 at 1280.620 kb on - strand, within Dshi_1235 at 1280.824 kb on + strand at 1280.896 kb on + strand, within Dshi_1236 at 1280.966 kb on - strand, within Dshi_1236 at 1281.141 kb on - strand, within Dshi_1236 at 1281.333 kb on - strand, within Dshi_1236 at 1281.539 kb on - strand, within Dshi_1236 at 1281.576 kb on - strand at 1281.576 kb on - strand at 1281.627 kb on + strand at 1281.669 kb on - strand at 1281.679 kb on - strand at 1281.682 kb on + strand at 1281.769 kb on - strand, within Dshi_1237 at 1281.918 kb on + strand, within Dshi_1237 at 1282.046 kb on - strand, within Dshi_1237 at 1282.198 kb on - strand, within Dshi_1237 at 1282.214 kb on + strand, within Dshi_1237 at 1282.291 kb on + strand, within Dshi_1237 at 1282.291 kb on + strand, within Dshi_1237 at 1282.291 kb on + strand, within Dshi_1237 at 1282.291 kb on + strand, within Dshi_1237 at 1282.313 kb on - strand, within Dshi_1237 at 1282.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,280,620 - Dshi_1235 0.87 -0.3 1,280,824 + +0.2 1,280,896 + Dshi_1236 0.14 -0.2 1,280,966 - Dshi_1236 0.22 +0.7 1,281,141 - Dshi_1236 0.42 -0.9 1,281,333 - Dshi_1236 0.63 +0.9 1,281,539 - Dshi_1236 0.86 +1.2 1,281,576 - -0.8 1,281,576 - -0.7 1,281,627 + +0.1 1,281,669 - -0.9 1,281,679 - -0.0 1,281,682 + -0.6 1,281,769 - Dshi_1237 0.14 +0.4 1,281,918 + Dshi_1237 0.34 -0.8 1,282,046 - Dshi_1237 0.51 -0.8 1,282,198 - Dshi_1237 0.72 +0.6 1,282,214 + Dshi_1237 0.74 +0.6 1,282,291 + Dshi_1237 0.84 +0.2 1,282,291 + Dshi_1237 0.84 -1.7 1,282,291 + Dshi_1237 0.84 -1.6 1,282,291 + Dshi_1237 0.84 -0.1 1,282,313 - Dshi_1237 0.87 -1.2 1,282,450 - -1.0
Or see this region's nucleotide sequence