Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1117 and Dshi_1118 overlap by 4 nucleotides Dshi_1118 and Dshi_1119 are separated by 23 nucleotides Dshi_1119 and Dshi_1120 are separated by 48 nucleotides
Dshi_1117: Dshi_1117 - thioesterase superfamily protein (RefSeq), at 1,142,513 to 1,142,929
_1117
Dshi_1118: Dshi_1118 - hypothetical protein (RefSeq), at 1,142,926 to 1,143,639
_1118
Dshi_1119: Dshi_1119 - DNA damage response helicase, ligase-associated (from data) , at 1,143,663 to 1,146,086
_1119
Dshi_1120: Dshi_1120 - hypothetical protein (RefSeq), at 1,146,135 to 1,147,442
_1120
Position (kb)
1143
1144
1145
1146
1147 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1142.770 kb on - strand, within Dshi_1117 at 1142.770 kb on - strand, within Dshi_1117 at 1143.930 kb on + strand, within Dshi_1119 at 1143.938 kb on - strand, within Dshi_1119 at 1143.978 kb on - strand, within Dshi_1119 at 1143.985 kb on + strand, within Dshi_1119 at 1144.180 kb on + strand, within Dshi_1119 at 1144.261 kb on + strand, within Dshi_1119 at 1144.317 kb on - strand, within Dshi_1119 at 1144.370 kb on + strand, within Dshi_1119 at 1144.572 kb on + strand, within Dshi_1119 at 1144.596 kb on - strand, within Dshi_1119 at 1144.769 kb on + strand, within Dshi_1119 at 1145.029 kb on - strand, within Dshi_1119 at 1145.750 kb on + strand, within Dshi_1119 at 1145.986 kb on - strand at 1145.996 kb on - strand at 1146.015 kb on - strand at 1146.019 kb on + strand at 1146.024 kb on + strand at 1146.027 kb on - strand at 1146.099 kb on - strand at 1146.174 kb on - strand at 1146.199 kb on - strand at 1146.364 kb on + strand, within Dshi_1120 at 1146.663 kb on + strand, within Dshi_1120 at 1146.663 kb on + strand, within Dshi_1120 at 1146.816 kb on + strand, within Dshi_1120 at 1146.881 kb on + strand, within Dshi_1120 at 1146.973 kb on - strand, within Dshi_1120 at 1147.003 kb on + strand, within Dshi_1120 at 1147.003 kb on + strand, within Dshi_1120 at 1147.011 kb on - strand, within Dshi_1120 at 1147.011 kb on - strand, within Dshi_1120 at 1147.011 kb on - strand, within Dshi_1120 at 1147.058 kb on - strand, within Dshi_1120 at 1147.058 kb on - strand, within Dshi_1120
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,142,770 - Dshi_1117 0.62 -0.6 1,142,770 - Dshi_1117 0.62 +0.8 1,143,930 + Dshi_1119 0.11 -2.0 1,143,938 - Dshi_1119 0.11 -2.5 1,143,978 - Dshi_1119 0.13 -1.0 1,143,985 + Dshi_1119 0.13 -1.3 1,144,180 + Dshi_1119 0.21 -1.3 1,144,261 + Dshi_1119 0.25 -3.9 1,144,317 - Dshi_1119 0.27 -0.6 1,144,370 + Dshi_1119 0.29 -0.6 1,144,572 + Dshi_1119 0.38 -0.0 1,144,596 - Dshi_1119 0.38 -1.3 1,144,769 + Dshi_1119 0.46 -4.1 1,145,029 - Dshi_1119 0.56 -2.7 1,145,750 + Dshi_1119 0.86 -2.7 1,145,986 - -2.8 1,145,996 - -1.8 1,146,015 - -1.6 1,146,019 + -1.0 1,146,024 + -3.3 1,146,027 - -2.0 1,146,099 - -0.5 1,146,174 - +0.6 1,146,199 - +1.6 1,146,364 + Dshi_1120 0.18 -0.0 1,146,663 + Dshi_1120 0.40 -1.2 1,146,663 + Dshi_1120 0.40 -0.0 1,146,816 + Dshi_1120 0.52 -1.0 1,146,881 + Dshi_1120 0.57 +0.3 1,146,973 - Dshi_1120 0.64 -2.2 1,147,003 + Dshi_1120 0.66 -0.7 1,147,003 + Dshi_1120 0.66 -0.6 1,147,011 - Dshi_1120 0.67 -1.3 1,147,011 - Dshi_1120 0.67 +1.6 1,147,011 - Dshi_1120 0.67 +2.0 1,147,058 - Dshi_1120 0.71 +0.7 1,147,058 - Dshi_1120 0.71 -1.3
Or see this region's nucleotide sequence