Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0918 and Dshi_0919 overlap by 4 nucleotides Dshi_0919 and Dshi_0920 overlap by 4 nucleotides Dshi_0920 and Dshi_0921 are separated by 22 nucleotides
Dshi_0918: Dshi_0918 - Auxin Efflux Carrier (RefSeq), at 942,472 to 943,404
_0918
Dshi_0919: Dshi_0919 - beta-lactamase domain protein (RefSeq), at 943,401 to 944,207
_0919
Dshi_0920: Dshi_0920 - hydrolase, TatD family (RefSeq), at 944,204 to 945,013
_0920
Dshi_0921: Dshi_0921 - DNA-directed DNA polymerase (RefSeq), at 945,036 to 946,181
_0921
Position (kb) 943
944
945 Strain fitness (log2 ratio) -1
0
1 at 942.425 kb on - strand at 942.478 kb on - strand at 942.580 kb on + strand, within Dshi_0918 at 942.702 kb on + strand, within Dshi_0918 at 942.761 kb on + strand, within Dshi_0918 at 942.833 kb on + strand, within Dshi_0918 at 942.901 kb on + strand, within Dshi_0918 at 942.984 kb on + strand, within Dshi_0918 at 943.055 kb on + strand, within Dshi_0918 at 943.227 kb on - strand, within Dshi_0918 at 943.227 kb on - strand, within Dshi_0918 at 943.282 kb on + strand, within Dshi_0918 at 943.559 kb on + strand, within Dshi_0919 at 943.560 kb on + strand, within Dshi_0919 at 943.560 kb on + strand, within Dshi_0919 at 943.634 kb on - strand, within Dshi_0919 at 943.656 kb on - strand, within Dshi_0919 at 943.802 kb on - strand, within Dshi_0919 at 943.866 kb on + strand, within Dshi_0919 at 943.968 kb on + strand, within Dshi_0919 at 943.976 kb on - strand, within Dshi_0919 at 943.977 kb on - strand, within Dshi_0919 at 943.989 kb on - strand, within Dshi_0919 at 944.043 kb on - strand, within Dshi_0919 at 944.426 kb on + strand, within Dshi_0920 at 944.516 kb on - strand, within Dshi_0920 at 944.559 kb on - strand, within Dshi_0920 at 944.588 kb on - strand, within Dshi_0920 at 944.742 kb on + strand, within Dshi_0920 at 944.841 kb on - strand, within Dshi_0920 at 945.017 kb on - strand at 945.071 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 942,425 - +0.0 942,478 - -0.3 942,580 + Dshi_0918 0.12 +0.9 942,702 + Dshi_0918 0.25 -0.0 942,761 + Dshi_0918 0.31 +1.3 942,833 + Dshi_0918 0.39 +0.5 942,901 + Dshi_0918 0.46 -0.8 942,984 + Dshi_0918 0.55 -0.1 943,055 + Dshi_0918 0.62 -1.0 943,227 - Dshi_0918 0.81 +0.4 943,227 - Dshi_0918 0.81 -0.4 943,282 + Dshi_0918 0.87 -0.1 943,559 + Dshi_0919 0.20 +0.9 943,560 + Dshi_0919 0.20 +0.9 943,560 + Dshi_0919 0.20 +0.9 943,634 - Dshi_0919 0.29 +0.4 943,656 - Dshi_0919 0.32 -0.2 943,802 - Dshi_0919 0.50 +0.3 943,866 + Dshi_0919 0.58 +0.9 943,968 + Dshi_0919 0.70 -0.1 943,976 - Dshi_0919 0.71 -0.1 943,977 - Dshi_0919 0.71 +0.9 943,989 - Dshi_0919 0.73 +0.6 944,043 - Dshi_0919 0.80 +0.0 944,426 + Dshi_0920 0.27 +1.5 944,516 - Dshi_0920 0.39 +0.8 944,559 - Dshi_0920 0.44 -0.3 944,588 - Dshi_0920 0.47 +0.8 944,742 + Dshi_0920 0.66 +0.3 944,841 - Dshi_0920 0.79 +0.5 945,017 - +1.3 945,071 - +0.7
Or see this region's nucleotide sequence