Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0435 and Dshi_0436 overlap by 4 nucleotides Dshi_0436 and Dshi_0437 overlap by 4 nucleotides Dshi_0437 and Dshi_0438 overlap by 4 nucleotides Dshi_0438 and Dshi_0439 overlap by 10 nucleotides Dshi_0439 and Dshi_0440 overlap by 4 nucleotides Dshi_0440 and Dshi_0441 are separated by 4 nucleotides
Dshi_0435: Dshi_0435 - ATP synthase F1, beta subunit (RefSeq), at 427,117 to 428,505
_0435
Dshi_0436: Dshi_0436 - ATP synthase F1, epsilon subunit (RefSeq), at 428,502 to 428,912
_0436
Dshi_0437: Dshi_0437 - F0F1-ATPase subunit, putative (RefSeq), at 428,909 to 429,196
_0437
Dshi_0438: Dshi_0438 - hypothetical protein (RefSeq), at 429,193 to 429,498
_0438
Dshi_0439: Dshi_0439 - ATP synthase F0, A subunit (RefSeq), at 429,489 to 430,178
_0439
Dshi_0440: Dshi_0440 - ATP synthase F0, C subunit (RefSeq), at 430,175 to 430,465
_0440
Dshi_0441: Dshi_0441 - H+transporting two-sector ATPase B/B' subunit (RefSeq), at 430,470 to 431,237
_0441
Position (kb) 429
430
431 Strain fitness (log2 ratio) -2
-1
0
1 at 428.530 kb on + strand at 428.571 kb on - strand, within Dshi_0436 at 428.781 kb on - strand, within Dshi_0436 at 428.831 kb on - strand, within Dshi_0436 at 428.957 kb on + strand, within Dshi_0437 at 429.079 kb on - strand, within Dshi_0437 at 429.183 kb on - strand at 429.273 kb on + strand, within Dshi_0438 at 429.281 kb on - strand, within Dshi_0438 at 429.330 kb on + strand, within Dshi_0438 at 429.332 kb on + strand, within Dshi_0438 at 429.342 kb on + strand, within Dshi_0438 at 429.411 kb on - strand, within Dshi_0438 at 429.492 kb on + strand at 429.533 kb on - strand at 429.587 kb on - strand, within Dshi_0439 at 429.607 kb on + strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.652 kb on + strand, within Dshi_0439 at 429.749 kb on + strand, within Dshi_0439 at 429.760 kb on + strand, within Dshi_0439 at 429.775 kb on + strand, within Dshi_0439 at 429.778 kb on - strand, within Dshi_0439 at 429.787 kb on + strand, within Dshi_0439 at 429.810 kb on + strand, within Dshi_0439 at 429.882 kb on - strand, within Dshi_0439 at 429.904 kb on + strand, within Dshi_0439 at 430.025 kb on + strand, within Dshi_0439 at 430.064 kb on - strand, within Dshi_0439 at 430.228 kb on - strand, within Dshi_0440 at 430.256 kb on - strand, within Dshi_0440 at 430.358 kb on + strand, within Dshi_0440 at 430.460 kb on + strand at 430.460 kb on + strand at 430.468 kb on - strand at 430.483 kb on + strand at 430.552 kb on + strand, within Dshi_0441 at 430.560 kb on - strand, within Dshi_0441 at 430.573 kb on + strand, within Dshi_0441 at 430.610 kb on + strand, within Dshi_0441 at 430.668 kb on + strand, within Dshi_0441 at 430.673 kb on + strand, within Dshi_0441 at 431.089 kb on - strand, within Dshi_0441 at 431.110 kb on - strand, within Dshi_0441 at 431.143 kb on + strand, within Dshi_0441 at 431.159 kb on - strand, within Dshi_0441
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 428,530 + -0.6 428,571 - Dshi_0436 0.17 +0.9 428,781 - Dshi_0436 0.68 +0.0 428,831 - Dshi_0436 0.80 +0.2 428,957 + Dshi_0437 0.17 +0.8 429,079 - Dshi_0437 0.59 -0.5 429,183 - +0.4 429,273 + Dshi_0438 0.26 +0.6 429,281 - Dshi_0438 0.29 +0.2 429,330 + Dshi_0438 0.45 +0.2 429,332 + Dshi_0438 0.45 +0.4 429,342 + Dshi_0438 0.49 -0.2 429,411 - Dshi_0438 0.71 -0.4 429,492 + +0.4 429,533 - +0.1 429,587 - Dshi_0439 0.14 -0.6 429,607 + Dshi_0439 0.17 -0.9 429,615 - Dshi_0439 0.18 -0.7 429,615 - Dshi_0439 0.18 +0.1 429,615 - Dshi_0439 0.18 +0.2 429,615 - Dshi_0439 0.18 -1.0 429,652 + Dshi_0439 0.24 -0.9 429,749 + Dshi_0439 0.38 +1.0 429,760 + Dshi_0439 0.39 -0.7 429,775 + Dshi_0439 0.41 -1.0 429,778 - Dshi_0439 0.42 -1.1 429,787 + Dshi_0439 0.43 -0.8 429,810 + Dshi_0439 0.47 +0.5 429,882 - Dshi_0439 0.57 -0.8 429,904 + Dshi_0439 0.60 -0.1 430,025 + Dshi_0439 0.78 -1.0 430,064 - Dshi_0439 0.83 -1.7 430,228 - Dshi_0440 0.18 -0.0 430,256 - Dshi_0440 0.28 +0.1 430,358 + Dshi_0440 0.63 -0.6 430,460 + -2.0 430,460 + +0.7 430,468 - +0.3 430,483 + -1.1 430,552 + Dshi_0441 0.11 +1.0 430,560 - Dshi_0441 0.12 +0.4 430,573 + Dshi_0441 0.13 +1.0 430,610 + Dshi_0441 0.18 -1.0 430,668 + Dshi_0441 0.26 -1.8 430,673 + Dshi_0441 0.26 -0.6 431,089 - Dshi_0441 0.81 -1.6 431,110 - Dshi_0441 0.83 -1.0 431,143 + Dshi_0441 0.88 +0.6 431,159 - Dshi_0441 0.90 +0.3
Or see this region's nucleotide sequence