Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3746 and Ga0059261_3747 are separated by 5 nucleotides Ga0059261_3747 and Ga0059261_3748 are separated by 114 nucleotides Ga0059261_3748 and Ga0059261_3749 are separated by 114 nucleotides
Ga0059261_3746: Ga0059261_3746 - ribosomal protein S5, bacterial/organelle type, at 3,848,871 to 3,849,584
_3746
Ga0059261_3747: Ga0059261_3747 - ribosomal protein L30, bacterial/organelle, at 3,849,590 to 3,849,787
_3747
Ga0059261_3748: Ga0059261_3748 - ribosomal protein L15, bacterial/organelle, at 3,849,902 to 3,850,438
_3748
Ga0059261_3749: Ga0059261_3749 - protein translocase subunit secY/sec61 alpha, at 3,850,553 to 3,851,917
_3749
Position (kb)
3849
3850
3851 Strain fitness (log2 ratio)
-1
0
1 at 3850.372 kb on + strand, within Ga0059261_3748 at 3850.372 kb on + strand, within Ga0059261_3748 at 3850.372 kb on + strand, within Ga0059261_3748 at 3850.372 kb on + strand, within Ga0059261_3748 at 3850.372 kb on + strand, within Ga0059261_3748 at 3850.372 kb on + strand at 3850.373 kb on - strand at 3850.373 kb on - strand, within Ga0059261_3748 at 3850.373 kb on - strand at 3850.373 kb on - strand, within Ga0059261_3748
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 3,850,372 + Ga0059261_3748 0.88 -0.7 3,850,372 + Ga0059261_3748 0.88 -0.8 3,850,372 + Ga0059261_3748 0.88 +0.2 3,850,372 + Ga0059261_3748 0.88 -1.4 3,850,372 + Ga0059261_3748 0.88 -1.0 3,850,372 + +1.2 3,850,373 - -1.2 3,850,373 - Ga0059261_3748 0.88 -1.2 3,850,373 - +1.2 3,850,373 - Ga0059261_3748 0.88 -0.7
Or see this region's nucleotide sequence