Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1572 and Ga0059261_1573 are separated by 77 nucleotides Ga0059261_1573 and Ga0059261_1574 are separated by 99 nucleotides
Ga0059261_1572: Ga0059261_1572 - FAD/FMN-containing dehydrogenases, at 1,643,068 to 1,644,510
_1572
Ga0059261_1573: Ga0059261_1573 - hypothetical protein, at 1,644,588 to 1,645,064
_1573
Ga0059261_1574: Ga0059261_1574 - Superfamily II DNA and RNA helicases, at 1,645,164 to 1,646,561
_1574
Position (kb)
1644
1645
1646 Strain fitness (log2 ratio)
-2
-1
0
1 at 1644.572 kb on + strand at 1644.573 kb on - strand at 1644.573 kb on - strand at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.940 kb on - strand at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.951 kb on + strand, within Ga0059261_1573 at 1644.952 kb on - strand, within Ga0059261_1573 at 1644.952 kb on - strand, within Ga0059261_1573 at 1645.028 kb on + strand at 1645.029 kb on - strand at 1645.062 kb on + strand at 1645.063 kb on - strand at 1645.084 kb on + strand at 1645.084 kb on + strand at 1645.084 kb on + strand at 1645.085 kb on - strand at 1645.085 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 1,644,572 + +0.1 1,644,573 - +1.3 1,644,573 - -0.7 1,644,939 + Ga0059261_1573 0.74 -1.1 1,644,939 + Ga0059261_1573 0.74 -2.3 1,644,939 + Ga0059261_1573 0.74 -1.0 1,644,939 + Ga0059261_1573 0.74 -0.7 1,644,939 + Ga0059261_1573 0.74 -0.7 1,644,939 + Ga0059261_1573 0.74 -0.8 1,644,939 + Ga0059261_1573 0.74 -0.2 1,644,939 + Ga0059261_1573 0.74 +0.1 1,644,939 + Ga0059261_1573 0.74 -0.3 1,644,940 - Ga0059261_1573 0.74 -2.1 1,644,940 - Ga0059261_1573 0.74 -1.1 1,644,940 - +1.3 1,644,940 - Ga0059261_1573 0.74 -2.6 1,644,940 - Ga0059261_1573 0.74 -1.1 1,644,951 + Ga0059261_1573 0.76 +0.4 1,644,952 - Ga0059261_1573 0.76 -2.0 1,644,952 - Ga0059261_1573 0.76 -0.4 1,645,028 + -0.8 1,645,029 - -0.7 1,645,062 + -0.6 1,645,063 - -1.4 1,645,084 + -0.4 1,645,084 + -1.4 1,645,084 + +1.1 1,645,085 - +0.5 1,645,085 - -0.5
Or see this region's nucleotide sequence