Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1398

Experiment: Chlorite 1.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1.25 mM
1,476,200	+		Ga0059261_1397	0.26	-0.2
1,476,201	-		Ga0059261_1397	0.26	+0.4
1,476,201	-		Ga0059261_1397	0.26	-0.5
1,476,201	-		Ga0059261_1397	0.26	-0.1
1,476,202	+		Ga0059261_1397	0.26	-0.8
1,476,203	-		Ga0059261_1397	0.26	-0.7
1,476,203	-		Ga0059261_1397	0.26	-0.4
1,476,203	-		Ga0059261_1397	0.26	-0.2
1,476,220	+		Ga0059261_1397	0.27	-0.5
1,476,220	+		Ga0059261_1397	0.27	-0.7
1,476,220	+		Ga0059261_1397	0.27	-1.1
1,476,220	+		Ga0059261_1397	0.27	-1.6
1,476,220	+		Ga0059261_1397	0.27	-0.2
1,476,220	+		Ga0059261_1397	0.27	+0.1
1,476,220	+				+0.9
1,476,221	-		Ga0059261_1397	0.27	-0.0
1,476,221	-		Ga0059261_1397	0.27	-0.9
1,476,221	-		Ga0059261_1397	0.27	-0.7
1,476,221	-		Ga0059261_1397	0.27	-0.5
1,476,221	-		Ga0059261_1397	0.27	+1.3
1,476,221	-		Ga0059261_1397	0.27	-0.6
1,476,221	-		Ga0059261_1397	0.27	-1.7
1,476,221	-		Ga0059261_1397	0.27	-0.5
1,476,334	+		Ga0059261_1397	0.37	-0.9
1,476,407	-		Ga0059261_1397	0.42	-1.1
1,476,495	-		Ga0059261_1397	0.50	-1.7
1,476,504	+		Ga0059261_1397	0.50	-0.3
1,476,504	+		Ga0059261_1397	0.50	+0.4
1,476,532	+		Ga0059261_1397	0.53	-0.2
1,476,532	+		Ga0059261_1397	0.53	-1.7
1,476,533	-		Ga0059261_1397	0.53	-0.9
1,476,533	-		Ga0059261_1397	0.53	-0.3
1,476,533	-		Ga0059261_1397	0.53	-1.1
1,476,661	+		Ga0059261_1397	0.63	-2.1
1,476,661	+		Ga0059261_1397	0.63	+0.0
1,476,661	+		Ga0059261_1397	0.63	+0.3
1,476,661	+		Ga0059261_1397	0.63	+0.0
1,476,661	+		Ga0059261_1397	0.63	-1.1
1,476,661	+		Ga0059261_1397	0.63	-1.2
1,476,662	-		Ga0059261_1397	0.63	+0.2
1,476,662	-		Ga0059261_1397	0.63	-0.5
1,476,664	+		Ga0059261_1397	0.63	-0.9
1,476,664	+		Ga0059261_1397	0.63	-0.7
1,476,664	+		Ga0059261_1397	0.63	-0.3
1,476,664	+		Ga0059261_1397	0.63	-1.2
1,476,664	+		Ga0059261_1397	0.63	+0.3
1,476,665	-		Ga0059261_1397	0.63	-1.6
1,476,665	-		Ga0059261_1397	0.63	+0.1
1,476,665	-		Ga0059261_1397	0.63	-0.3
1,476,665	-		Ga0059261_1397	0.63	-0.7
1,476,665	-		Ga0059261_1397	0.63	+0.3
1,476,665	-		Ga0059261_1397	0.63	+0.3
1,476,676	+		Ga0059261_1397	0.64	-1.4
1,476,706	+		Ga0059261_1397	0.67	-0.9
1,476,706	+		Ga0059261_1397	0.67	-0.5
1,476,706	+		Ga0059261_1397	0.67	+0.9
1,476,706	+		Ga0059261_1397	0.67	-0.7
1,476,706	+		Ga0059261_1397	0.67	+0.3
1,476,707	-		Ga0059261_1397	0.67	-0.3
1,476,707	-		Ga0059261_1397	0.67	+0.0
1,476,727	+		Ga0059261_1397	0.69	-2.1
1,476,727	+		Ga0059261_1397	0.69	-0.2
1,476,727	+		Ga0059261_1397	0.69	-0.7
1,476,727	+		Ga0059261_1397	0.69	-0.2
1,476,727	+		Ga0059261_1397	0.69	+0.3
1,476,728	-		Ga0059261_1397	0.69	-0.2
1,476,728	-		Ga0059261_1397	0.69	-0.3
1,476,728	-		Ga0059261_1397	0.69	-0.6
1,476,728	-		Ga0059261_1397	0.69	-0.6
1,476,728	-		Ga0059261_1397	0.69	-0.6
1,477,118	+				+0.3
1,477,119	-				-0.2
1,477,119	-				-0.5
1,477,119	-				-0.1
1,477,172	+				-0.3
1,477,173	-				+0.3
1,477,173	-				+0.1
1,477,173	-				-0.6
1,477,194	+				-1.5
1,477,194	+				-0.3
1,477,194	+				-1.2
1,477,194	+				-2.4
1,477,194	+				-1.1
1,477,195	-				-1.0
1,477,195	-				-0.9
1,477,195	-				-0.5
1,477,195	-				-0.6
1,477,203	+				-2.9
1,477,204	-				-0.7
1,477,204	-				-1.6
1,477,284	+		Ga0059261_1398	0.14	+0.5
1,477,284	+		Ga0059261_1398	0.14	-1.1
1,477,285	-		Ga0059261_1398	0.14	-1.9
1,477,285	-		Ga0059261_1398	0.14	-1.7
1,477,285	-		Ga0059261_1398	0.14	-1.1
1,477,285	-		Ga0059261_1398	0.14	-1.5
1,477,425	+		Ga0059261_1398	0.33	-1.1
1,477,428	+		Ga0059261_1398	0.33	+0.4
1,477,429	-		Ga0059261_1398	0.33	-0.4
1,477,429	-		Ga0059261_1398	0.33	-1.0
1,477,429	-		Ga0059261_1398	0.33	-0.5
1,477,429	-		Ga0059261_1398	0.33	+0.2
1,477,440	+		Ga0059261_1398	0.35	-0.6
1,477,441	-		Ga0059261_1398	0.35	-1.0
1,477,441	-		Ga0059261_1398	0.35	-1.6
1,477,441	-		Ga0059261_1398	0.35	-0.5
1,477,693	-		Ga0059261_1398	0.68	+0.0
1,478,177	+		Ga0059261_1399	0.35	-0.8
1,478,178	-		Ga0059261_1399	0.35	-1.5
1,478,201	+		Ga0059261_1399	0.38	-1.2
1,478,201	+		Ga0059261_1399	0.38	-1.3
1,478,201	+		Ga0059261_1399	0.38	-1.6
1,478,201	+		Ga0059261_1399	0.38	-0.4
1,478,201	+		Ga0059261_1399	0.38	-0.9
1,478,201	+		Ga0059261_1399	0.38	-1.8
1,478,201	+		Ga0059261_1399	0.38	-0.3
1,478,201	+		Ga0059261_1399	0.38	-1.0
1,478,202	-		Ga0059261_1399	0.38	-1.1
1,478,202	-		Ga0059261_1399	0.38	-0.3
1,478,202	-		Ga0059261_1399	0.38	-0.5
1,478,411	+		Ga0059261_1399	0.67	-0.5
1,478,411	+		Ga0059261_1399	0.67	-1.0
1,478,411	+		Ga0059261_1399	0.67	+0.3
1,478,412	-		Ga0059261_1399	0.67	-1.4
1,478,412	-		Ga0059261_1399	0.67	-2.1
1,478,490	-		Ga0059261_1399	0.78	-1.7
1,478,490	-		Ga0059261_1399	0.78	-0.4
1,478,490	-		Ga0059261_1399	0.78	-0.9
1,478,490	-		Ga0059261_1399	0.78	-1.9
1,478,501	+		Ga0059261_1399	0.79	+0.9
1,478,501	+		Ga0059261_1399	0.79	-1.2
1,478,501	+		Ga0059261_1399	0.79	-1.0
1,478,501	+		Ga0059261_1399	0.79	-1.0
1,478,501	+		Ga0059261_1399	0.79	-0.9
1,478,501	+		Ga0059261_1399	0.79	-1.8
1,478,501	+		Ga0059261_1399	0.79	-0.2
1,478,502	-		Ga0059261_1399	0.80	-1.7
1,478,502	-		Ga0059261_1399	0.80	-0.1
1,478,502	-		Ga0059261_1399	0.80	-0.7
1,478,502	-		Ga0059261_1399	0.80	-0.5
1,478,502	-		Ga0059261_1399	0.80	-1.5
1,478,513	+		Ga0059261_1399	0.81	-0.7
1,478,513	+		Ga0059261_1399	0.81	-0.7
1,478,513	+		Ga0059261_1399	0.81	-1.4
1,478,513	+		Ga0059261_1399	0.81	-2.3
1,478,513	+		Ga0059261_1399	0.81	+0.5
1,478,514	-		Ga0059261_1399	0.81	-0.3
1,478,514	-		Ga0059261_1399	0.81	-0.8
1,478,659	+				+0.3
1,478,659	+				-1.3
1,478,659	+				-1.3
1,478,659	+				-1.0
1,478,659	+				-1.1
1,478,659	+				-0.6
1,478,659	+				+0.3
1,478,660	-				+0.2
1,478,660	-				-1.5
1,478,682	+				-1.0
1,478,896	-		Ga0059261_1400	0.21	+0.7