Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1338 and Ga0059261_1339 overlap by 1 nucleotides Ga0059261_1339 and Ga0059261_1340 are separated by 0 nucleotides Ga0059261_1340 and Ga0059261_1341 are separated by 85 nucleotides
Ga0059261_1338: Ga0059261_1338 - malate dehydrogenase (NAD) (EC 1.1.1.37), at 1,404,278 to 1,405,240
_1338
Ga0059261_1339: Ga0059261_1339 - hypothetical protein, at 1,405,240 to 1,405,836
_1339
Ga0059261_1340: Ga0059261_1340 - succinyl-CoA synthetase, alpha subunit, at 1,405,837 to 1,406,721
_1340
Ga0059261_1341: Ga0059261_1341 - 2-oxoglutarate dehydrogenase, E1 component, at 1,406,807 to 1,409,776
_1341
Position (kb) 1405
1406 Strain fitness (log2 ratio) -2
-1
0
1 at 1405.609 kb on + strand, within Ga0059261_1339 at 1405.749 kb on + strand, within Ga0059261_1339 at 1405.753 kb on + strand, within Ga0059261_1339 at 1405.753 kb on + strand, within Ga0059261_1339 at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.791 kb on + strand at 1405.791 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 1,405,609 + Ga0059261_1339 0.62 -1.6 1,405,749 + Ga0059261_1339 0.85 +1.2 1,405,753 + Ga0059261_1339 0.86 -0.6 1,405,753 + Ga0059261_1339 0.86 -1.9 1,405,786 + -1.7 1,405,786 + -0.8 1,405,786 + -1.4 1,405,786 + -0.2 1,405,786 + -0.6 1,405,786 + -0.7 1,405,786 + -1.2 1,405,791 + -0.5 1,405,791 + -1.0
Or see this region's nucleotide sequence