Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0646 and Ga0059261_0647 overlap by 4 nucleotides Ga0059261_0647 and Ga0059261_0648 are separated by 9 nucleotides
Ga0059261_0646: Ga0059261_0646 - methionyl-tRNA formyltransferase, at 686,523 to 687,446
_0646
Ga0059261_0647: Ga0059261_0647 - tRNA pseudouridine(38-40) synthase, at 687,443 to 688,183
_0647
Ga0059261_0648: Ga0059261_0648 - SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase, at 688,193 to 689,389
_0648
Position (kb) 687
688
689 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 686.528 kb on + strand at 686.528 kb on + strand at 686.528 kb on + strand at 687.470 kb on + strand at 687.471 kb on - strand at 687.501 kb on - strand at 687.773 kb on + strand, within Ga0059261_0647 at 687.773 kb on + strand at 687.773 kb on + strand, within Ga0059261_0647 at 687.773 kb on + strand, within Ga0059261_0647 at 687.773 kb on + strand, within Ga0059261_0647 at 687.773 kb on + strand, within Ga0059261_0647 at 687.773 kb on + strand, within Ga0059261_0647 at 687.774 kb on - strand, within Ga0059261_0647 at 687.774 kb on - strand, within Ga0059261_0647 at 687.774 kb on - strand, within Ga0059261_0647 at 687.774 kb on - strand, within Ga0059261_0647 at 687.774 kb on - strand, within Ga0059261_0647 at 687.779 kb on + strand, within Ga0059261_0647 at 687.779 kb on + strand, within Ga0059261_0647 at 687.779 kb on + strand, within Ga0059261_0647 at 687.779 kb on + strand, within Ga0059261_0647 at 687.779 kb on + strand, within Ga0059261_0647 at 687.780 kb on - strand, within Ga0059261_0647 at 687.998 kb on + strand, within Ga0059261_0647 at 688.157 kb on + strand at 688.157 kb on + strand at 688.175 kb on + strand at 688.176 kb on - strand at 688.332 kb on + strand, within Ga0059261_0648 at 688.332 kb on + strand, within Ga0059261_0648 at 688.332 kb on + strand, within Ga0059261_0648 at 688.332 kb on + strand, within Ga0059261_0648 at 688.333 kb on - strand, within Ga0059261_0648 at 688.333 kb on - strand, within Ga0059261_0648 at 688.548 kb on + strand, within Ga0059261_0648 at 688.548 kb on + strand, within Ga0059261_0648 at 688.548 kb on + strand, within Ga0059261_0648 at 688.548 kb on + strand at 688.548 kb on + strand, within Ga0059261_0648 at 688.548 kb on + strand, within Ga0059261_0648 at 688.549 kb on - strand, within Ga0059261_0648 at 688.549 kb on - strand, within Ga0059261_0648 at 688.714 kb on + strand, within Ga0059261_0648
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 686,528 + -0.0 686,528 + -0.6 686,528 + -0.9 687,470 + -1.2 687,471 - -1.2 687,501 - -1.2 687,773 + Ga0059261_0647 0.45 -1.2 687,773 + -0.2 687,773 + Ga0059261_0647 0.45 -0.3 687,773 + Ga0059261_0647 0.45 +0.3 687,773 + Ga0059261_0647 0.45 -1.8 687,773 + Ga0059261_0647 0.45 -0.9 687,773 + Ga0059261_0647 0.45 -0.7 687,774 - Ga0059261_0647 0.45 -0.3 687,774 - Ga0059261_0647 0.45 -1.7 687,774 - Ga0059261_0647 0.45 -1.8 687,774 - Ga0059261_0647 0.45 -1.2 687,774 - Ga0059261_0647 0.45 -0.5 687,779 + Ga0059261_0647 0.45 +0.3 687,779 + Ga0059261_0647 0.45 -0.2 687,779 + Ga0059261_0647 0.45 -1.0 687,779 + Ga0059261_0647 0.45 -0.2 687,779 + Ga0059261_0647 0.45 -2.9 687,780 - Ga0059261_0647 0.45 -0.7 687,998 + Ga0059261_0647 0.75 -1.3 688,157 + -1.2 688,157 + -1.1 688,175 + -0.7 688,176 - -0.3 688,332 + Ga0059261_0648 0.12 -0.3 688,332 + Ga0059261_0648 0.12 -0.7 688,332 + Ga0059261_0648 0.12 -0.9 688,332 + Ga0059261_0648 0.12 -0.3 688,333 - Ga0059261_0648 0.12 -0.8 688,333 - Ga0059261_0648 0.12 +1.1 688,548 + Ga0059261_0648 0.30 -0.5 688,548 + Ga0059261_0648 0.30 -0.0 688,548 + Ga0059261_0648 0.30 -0.3 688,548 + +1.1 688,548 + Ga0059261_0648 0.30 +0.7 688,548 + Ga0059261_0648 0.30 -0.6 688,549 - Ga0059261_0648 0.30 +1.0 688,549 - Ga0059261_0648 0.30 -1.5 688,714 + Ga0059261_0648 0.44 -0.2
Or see this region's nucleotide sequence