Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0619 and Ga0059261_0620 are separated by 449 nucleotides Ga0059261_0620 and Ga0059261_0621 are separated by 57 nucleotides Ga0059261_0621 and Ga0059261_0622 overlap by 4 nucleotides
Ga0059261_0619: Ga0059261_0619 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 658,136 to 659,476
_0619
Ga0059261_0620: Ga0059261_0620 - Outer membrane cobalamin receptor protein, at 659,926 to 661,821
_0620
Ga0059261_0621: Ga0059261_0621 - cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17), at 661,879 to 662,487
_0621
Ga0059261_0622: Ga0059261_0622 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 662,484 to 663,323
_0622
Position (kb) 659
660
661
662 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 659.036 kb on + strand, within Ga0059261_0619 at 659.036 kb on + strand, within Ga0059261_0619 at 659.036 kb on + strand, within Ga0059261_0619 at 659.318 kb on + strand, within Ga0059261_0619 at 659.318 kb on + strand, within Ga0059261_0619 at 659.319 kb on - strand, within Ga0059261_0619 at 659.319 kb on - strand, within Ga0059261_0619 at 659.411 kb on + strand at 659.411 kb on + strand at 659.412 kb on - strand at 659.510 kb on - strand at 659.510 kb on - strand at 659.639 kb on + strand at 659.639 kb on + strand at 659.639 kb on + strand at 659.639 kb on + strand at 659.640 kb on - strand at 659.640 kb on - strand at 659.640 kb on - strand at 659.640 kb on - strand at 659.956 kb on + strand at 659.956 kb on + strand at 659.956 kb on + strand at 659.956 kb on + strand at 659.957 kb on - strand at 659.957 kb on - strand at 659.957 kb on - strand at 659.962 kb on + strand at 659.963 kb on - strand at 659.963 kb on - strand at 660.241 kb on + strand, within Ga0059261_0620 at 660.241 kb on + strand, within Ga0059261_0620 at 660.241 kb on + strand, within Ga0059261_0620 at 660.242 kb on - strand, within Ga0059261_0620 at 660.242 kb on - strand, within Ga0059261_0620 at 660.242 kb on - strand, within Ga0059261_0620 at 660.242 kb on - strand, within Ga0059261_0620 at 660.242 kb on - strand, within Ga0059261_0620 at 660.242 kb on - strand, within Ga0059261_0620 at 660.292 kb on + strand, within Ga0059261_0620 at 660.292 kb on + strand, within Ga0059261_0620 at 660.292 kb on + strand, within Ga0059261_0620 at 660.364 kb on + strand, within Ga0059261_0620 at 660.364 kb on + strand, within Ga0059261_0620 at 660.452 kb on - strand, within Ga0059261_0620 at 660.452 kb on - strand, within Ga0059261_0620 at 660.460 kb on + strand, within Ga0059261_0620 at 660.460 kb on + strand, within Ga0059261_0620 at 660.460 kb on + strand, within Ga0059261_0620 at 660.460 kb on + strand, within Ga0059261_0620 at 660.536 kb on - strand, within Ga0059261_0620 at 660.598 kb on + strand, within Ga0059261_0620 at 660.599 kb on - strand, within Ga0059261_0620 at 660.599 kb on - strand, within Ga0059261_0620 at 660.599 kb on - strand, within Ga0059261_0620 at 660.748 kb on + strand, within Ga0059261_0620 at 660.748 kb on + strand, within Ga0059261_0620 at 660.748 kb on + strand, within Ga0059261_0620 at 660.748 kb on + strand, within Ga0059261_0620 at 660.748 kb on + strand, within Ga0059261_0620 at 660.748 kb on + strand, within Ga0059261_0620 at 660.748 kb on + strand, within Ga0059261_0620 at 660.749 kb on - strand, within Ga0059261_0620 at 660.766 kb on + strand, within Ga0059261_0620 at 660.814 kb on + strand, within Ga0059261_0620 at 660.814 kb on + strand, within Ga0059261_0620 at 660.814 kb on + strand, within Ga0059261_0620 at 660.814 kb on + strand, within Ga0059261_0620 at 660.815 kb on - strand, within Ga0059261_0620 at 660.868 kb on + strand, within Ga0059261_0620 at 660.868 kb on + strand, within Ga0059261_0620 at 660.869 kb on - strand, within Ga0059261_0620 at 660.869 kb on - strand, within Ga0059261_0620 at 660.907 kb on + strand, within Ga0059261_0620 at 660.907 kb on + strand, within Ga0059261_0620 at 660.907 kb on + strand, within Ga0059261_0620 at 660.907 kb on + strand, within Ga0059261_0620 at 660.908 kb on - strand, within Ga0059261_0620 at 660.908 kb on - strand, within Ga0059261_0620 at 660.908 kb on - strand, within Ga0059261_0620 at 660.949 kb on + strand, within Ga0059261_0620 at 660.949 kb on + strand, within Ga0059261_0620 at 660.961 kb on + strand, within Ga0059261_0620 at 660.961 kb on + strand, within Ga0059261_0620 at 660.961 kb on + strand, within Ga0059261_0620 at 660.961 kb on + strand, within Ga0059261_0620 at 660.961 kb on + strand, within Ga0059261_0620 at 660.962 kb on - strand, within Ga0059261_0620 at 660.962 kb on - strand, within Ga0059261_0620 at 660.963 kb on + strand at 660.964 kb on - strand, within Ga0059261_0620 at 660.964 kb on - strand, within Ga0059261_0620 at 661.093 kb on - strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.117 kb on + strand, within Ga0059261_0620 at 661.118 kb on - strand, within Ga0059261_0620 at 661.118 kb on - strand, within Ga0059261_0620 at 661.118 kb on - strand, within Ga0059261_0620 at 661.118 kb on - strand, within Ga0059261_0620 at 661.135 kb on + strand, within Ga0059261_0620 at 661.135 kb on + strand, within Ga0059261_0620 at 661.135 kb on + strand, within Ga0059261_0620 at 661.135 kb on + strand, within Ga0059261_0620 at 661.135 kb on + strand, within Ga0059261_0620 at 661.136 kb on - strand, within Ga0059261_0620 at 661.136 kb on - strand, within Ga0059261_0620 at 661.136 kb on - strand, within Ga0059261_0620 at 661.136 kb on - strand, within Ga0059261_0620 at 661.136 kb on - strand, within Ga0059261_0620 at 661.186 kb on + strand, within Ga0059261_0620 at 661.186 kb on + strand, within Ga0059261_0620 at 661.186 kb on + strand, within Ga0059261_0620 at 661.186 kb on + strand, within Ga0059261_0620 at 661.187 kb on - strand, within Ga0059261_0620 at 661.187 kb on - strand, within Ga0059261_0620 at 661.187 kb on - strand, within Ga0059261_0620 at 661.187 kb on - strand, within Ga0059261_0620 at 661.216 kb on + strand, within Ga0059261_0620 at 661.216 kb on + strand, within Ga0059261_0620 at 661.217 kb on - strand, within Ga0059261_0620 at 661.217 kb on - strand, within Ga0059261_0620 at 661.237 kb on + strand, within Ga0059261_0620 at 661.237 kb on + strand, within Ga0059261_0620 at 661.237 kb on + strand, within Ga0059261_0620 at 661.238 kb on - strand, within Ga0059261_0620 at 661.238 kb on - strand, within Ga0059261_0620 at 661.238 kb on - strand, within Ga0059261_0620 at 661.238 kb on - strand, within Ga0059261_0620 at 661.243 kb on + strand, within Ga0059261_0620 at 661.244 kb on - strand, within Ga0059261_0620 at 661.331 kb on - strand, within Ga0059261_0620 at 661.363 kb on + strand, within Ga0059261_0620 at 661.363 kb on + strand, within Ga0059261_0620 at 661.363 kb on + strand, within Ga0059261_0620 at 661.364 kb on - strand, within Ga0059261_0620 at 661.393 kb on + strand, within Ga0059261_0620 at 661.393 kb on + strand, within Ga0059261_0620 at 661.393 kb on + strand, within Ga0059261_0620 at 661.393 kb on + strand, within Ga0059261_0620 at 661.393 kb on + strand, within Ga0059261_0620 at 661.394 kb on - strand, within Ga0059261_0620 at 661.394 kb on - strand, within Ga0059261_0620 at 661.394 kb on - strand, within Ga0059261_0620 at 661.394 kb on - strand, within Ga0059261_0620 at 661.394 kb on - strand, within Ga0059261_0620 at 661.395 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.487 kb on - strand, within Ga0059261_0620 at 661.487 kb on - strand, within Ga0059261_0620 at 661.487 kb on - strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.527 kb on - strand, within Ga0059261_0620 at 661.527 kb on - strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.533 kb on - strand, within Ga0059261_0620 at 661.666 kb on + strand at 661.666 kb on + strand at 661.667 kb on - strand at 661.667 kb on - strand at 661.667 kb on - strand at 661.667 kb on - strand at 661.701 kb on + strand at 661.710 kb on + strand at 661.710 kb on + strand at 661.710 kb on + strand at 661.711 kb on - strand at 661.720 kb on + strand at 661.720 kb on + strand at 661.720 kb on + strand at 661.720 kb on + strand at 661.721 kb on - strand at 661.754 kb on - strand at 661.755 kb on + strand at 661.795 kb on + strand at 661.795 kb on + strand at 662.255 kb on - strand, within Ga0059261_0621 at 662.255 kb on - strand, within Ga0059261_0621 at 662.255 kb on - strand, within Ga0059261_0621 at 662.296 kb on + strand, within Ga0059261_0621 at 662.296 kb on + strand, within Ga0059261_0621 at 662.297 kb on - strand, within Ga0059261_0621 at 662.302 kb on + strand at 662.302 kb on + strand, within Ga0059261_0621 at 662.302 kb on + strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.533 kb on + strand at 662.533 kb on + strand at 662.533 kb on + strand at 662.533 kb on + strand at 662.534 kb on - strand at 662.585 kb on + strand, within Ga0059261_0622 at 662.585 kb on + strand, within Ga0059261_0622 at 662.679 kb on + strand, within Ga0059261_0622 at 662.680 kb on - strand, within Ga0059261_0622 at 662.809 kb on + strand, within Ga0059261_0622 at 662.810 kb on - strand, within Ga0059261_0622 at 662.810 kb on - strand, within Ga0059261_0622 at 662.810 kb on - strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.813 kb on - strand, within Ga0059261_0622
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 659,036 + Ga0059261_0619 0.67 -0.1 659,036 + Ga0059261_0619 0.67 +1.3 659,036 + Ga0059261_0619 0.67 -1.1 659,318 + Ga0059261_0619 0.88 -0.7 659,318 + Ga0059261_0619 0.88 +0.7 659,319 - Ga0059261_0619 0.88 +0.6 659,319 - Ga0059261_0619 0.88 -0.5 659,411 + -0.3 659,411 + +0.4 659,412 - +0.8 659,510 - +0.1 659,510 - -0.9 659,639 + -0.5 659,639 + -0.2 659,639 + -1.6 659,639 + -0.5 659,640 - -0.5 659,640 - -0.5 659,640 - -1.3 659,640 - -0.5 659,956 + +0.7 659,956 + +0.1 659,956 + -0.8 659,956 + -0.5 659,957 - -1.8 659,957 - -1.0 659,957 - +0.3 659,962 + +0.4 659,963 - +0.8 659,963 - -1.3 660,241 + Ga0059261_0620 0.17 -0.3 660,241 + Ga0059261_0620 0.17 -0.8 660,241 + Ga0059261_0620 0.17 +0.1 660,242 - Ga0059261_0620 0.17 -0.8 660,242 - Ga0059261_0620 0.17 -1.0 660,242 - Ga0059261_0620 0.17 -1.5 660,242 - Ga0059261_0620 0.17 -0.1 660,242 - Ga0059261_0620 0.17 -1.2 660,242 - Ga0059261_0620 0.17 -0.7 660,292 + Ga0059261_0620 0.19 -1.5 660,292 + Ga0059261_0620 0.19 -0.4 660,292 + Ga0059261_0620 0.19 -0.4 660,364 + Ga0059261_0620 0.23 +0.4 660,364 + Ga0059261_0620 0.23 +0.4 660,452 - Ga0059261_0620 0.28 +0.5 660,452 - Ga0059261_0620 0.28 -1.7 660,460 + Ga0059261_0620 0.28 +0.5 660,460 + Ga0059261_0620 0.28 -0.9 660,460 + Ga0059261_0620 0.28 -0.3 660,460 + Ga0059261_0620 0.28 -2.8 660,536 - Ga0059261_0620 0.32 -0.5 660,598 + Ga0059261_0620 0.35 -1.6 660,599 - Ga0059261_0620 0.35 -2.6 660,599 - Ga0059261_0620 0.35 -1.1 660,599 - Ga0059261_0620 0.35 -1.7 660,748 + Ga0059261_0620 0.43 -0.9 660,748 + Ga0059261_0620 0.43 +0.1 660,748 + Ga0059261_0620 0.43 -0.5 660,748 + Ga0059261_0620 0.43 -0.9 660,748 + Ga0059261_0620 0.43 -0.5 660,748 + Ga0059261_0620 0.43 -1.2 660,748 + Ga0059261_0620 0.43 +0.5 660,749 - Ga0059261_0620 0.43 -1.4 660,766 + Ga0059261_0620 0.44 -1.1 660,814 + Ga0059261_0620 0.47 -0.3 660,814 + Ga0059261_0620 0.47 -0.8 660,814 + Ga0059261_0620 0.47 +0.4 660,814 + Ga0059261_0620 0.47 -1.6 660,815 - Ga0059261_0620 0.47 -0.9 660,868 + Ga0059261_0620 0.50 -2.1 660,868 + Ga0059261_0620 0.50 -0.7 660,869 - Ga0059261_0620 0.50 -0.4 660,869 - Ga0059261_0620 0.50 -0.6 660,907 + Ga0059261_0620 0.52 -0.0 660,907 + Ga0059261_0620 0.52 +0.3 660,907 + Ga0059261_0620 0.52 -1.0 660,907 + Ga0059261_0620 0.52 -0.5 660,908 - Ga0059261_0620 0.52 -0.9 660,908 - Ga0059261_0620 0.52 -1.1 660,908 - Ga0059261_0620 0.52 -0.7 660,949 + Ga0059261_0620 0.54 -1.2 660,949 + Ga0059261_0620 0.54 +1.1 660,961 + Ga0059261_0620 0.55 -0.6 660,961 + Ga0059261_0620 0.55 -1.2 660,961 + Ga0059261_0620 0.55 +1.1 660,961 + Ga0059261_0620 0.55 -0.3 660,961 + Ga0059261_0620 0.55 -0.3 660,962 - Ga0059261_0620 0.55 +0.7 660,962 - Ga0059261_0620 0.55 -0.1 660,963 + +0.1 660,964 - Ga0059261_0620 0.55 -0.8 660,964 - Ga0059261_0620 0.55 -1.5 661,093 - Ga0059261_0620 0.62 -0.3 661,117 + Ga0059261_0620 0.63 +0.5 661,117 + Ga0059261_0620 0.63 -1.0 661,117 + Ga0059261_0620 0.63 +0.3 661,117 + Ga0059261_0620 0.63 -0.0 661,117 + Ga0059261_0620 0.63 -0.3 661,117 + Ga0059261_0620 0.63 -0.5 661,117 + Ga0059261_0620 0.63 -0.5 661,117 + Ga0059261_0620 0.63 +0.7 661,118 - Ga0059261_0620 0.63 +0.4 661,118 - Ga0059261_0620 0.63 -0.5 661,118 - Ga0059261_0620 0.63 -0.4 661,118 - Ga0059261_0620 0.63 -0.5 661,135 + Ga0059261_0620 0.64 -0.4 661,135 + Ga0059261_0620 0.64 -1.2 661,135 + Ga0059261_0620 0.64 -0.6 661,135 + Ga0059261_0620 0.64 -2.0 661,135 + Ga0059261_0620 0.64 -1.1 661,136 - Ga0059261_0620 0.64 -0.7 661,136 - Ga0059261_0620 0.64 +0.2 661,136 - Ga0059261_0620 0.64 +1.1 661,136 - Ga0059261_0620 0.64 +0.1 661,136 - Ga0059261_0620 0.64 -0.3 661,186 + Ga0059261_0620 0.66 +0.7 661,186 + Ga0059261_0620 0.66 -0.8 661,186 + Ga0059261_0620 0.66 -0.1 661,186 + Ga0059261_0620 0.66 -0.3 661,187 - Ga0059261_0620 0.67 -0.3 661,187 - Ga0059261_0620 0.67 -0.5 661,187 - Ga0059261_0620 0.67 -1.0 661,187 - Ga0059261_0620 0.67 -1.3 661,216 + Ga0059261_0620 0.68 -0.0 661,216 + Ga0059261_0620 0.68 +0.1 661,217 - Ga0059261_0620 0.68 -0.5 661,217 - Ga0059261_0620 0.68 -0.7 661,237 + Ga0059261_0620 0.69 +1.1 661,237 + Ga0059261_0620 0.69 +0.7 661,237 + Ga0059261_0620 0.69 -0.2 661,238 - Ga0059261_0620 0.69 -0.4 661,238 - Ga0059261_0620 0.69 -2.7 661,238 - Ga0059261_0620 0.69 -0.6 661,238 - Ga0059261_0620 0.69 -0.3 661,243 + Ga0059261_0620 0.69 -1.2 661,244 - Ga0059261_0620 0.70 -1.3 661,331 - Ga0059261_0620 0.74 -0.5 661,363 + Ga0059261_0620 0.76 +0.5 661,363 + Ga0059261_0620 0.76 -1.2 661,363 + Ga0059261_0620 0.76 +0.0 661,364 - Ga0059261_0620 0.76 -1.6 661,393 + Ga0059261_0620 0.77 +0.1 661,393 + Ga0059261_0620 0.77 +0.1 661,393 + Ga0059261_0620 0.77 -0.9 661,393 + Ga0059261_0620 0.77 -1.3 661,393 + Ga0059261_0620 0.77 -2.5 661,394 - Ga0059261_0620 0.77 -0.8 661,394 - Ga0059261_0620 0.77 -0.2 661,394 - Ga0059261_0620 0.77 +0.1 661,394 - Ga0059261_0620 0.77 -0.7 661,394 - Ga0059261_0620 0.77 -0.9 661,395 + Ga0059261_0620 0.77 -0.1 661,486 + Ga0059261_0620 0.82 -1.4 661,486 + Ga0059261_0620 0.82 -2.2 661,486 + Ga0059261_0620 0.82 -0.2 661,486 + Ga0059261_0620 0.82 -1.1 661,486 + Ga0059261_0620 0.82 -0.5 661,486 + Ga0059261_0620 0.82 -0.3 661,487 - Ga0059261_0620 0.82 -1.8 661,487 - Ga0059261_0620 0.82 -0.5 661,487 - Ga0059261_0620 0.82 -3.0 661,526 + Ga0059261_0620 0.84 -1.0 661,526 + Ga0059261_0620 0.84 -1.0 661,526 + Ga0059261_0620 0.84 -1.2 661,526 + Ga0059261_0620 0.84 -0.9 661,526 + Ga0059261_0620 0.84 +0.3 661,526 + Ga0059261_0620 0.84 -0.3 661,527 - Ga0059261_0620 0.84 -0.4 661,527 - Ga0059261_0620 0.84 +1.3 661,532 + Ga0059261_0620 0.85 +0.8 661,532 + Ga0059261_0620 0.85 -3.0 661,532 + Ga0059261_0620 0.85 -1.7 661,532 + Ga0059261_0620 0.85 -0.4 661,533 - Ga0059261_0620 0.85 -0.5 661,666 + -0.3 661,666 + -1.6 661,667 - +0.3 661,667 - -1.9 661,667 - -0.7 661,667 - -0.6 661,701 + +1.1 661,710 + +0.1 661,710 + -1.3 661,710 + -1.7 661,711 - -1.4 661,720 + +0.8 661,720 + -0.2 661,720 + -1.3 661,720 + -0.1 661,721 - +1.1 661,754 - -1.6 661,755 + -0.7 661,795 + +0.1 661,795 + -2.1 662,255 - Ga0059261_0621 0.62 -0.2 662,255 - Ga0059261_0621 0.62 -0.7 662,255 - Ga0059261_0621 0.62 +0.1 662,296 + Ga0059261_0621 0.68 -0.3 662,296 + Ga0059261_0621 0.68 -1.5 662,297 - Ga0059261_0621 0.69 +0.6 662,302 + -0.9 662,302 + Ga0059261_0621 0.69 -2.3 662,302 + Ga0059261_0621 0.69 -0.6 662,303 - Ga0059261_0621 0.70 -0.6 662,303 - Ga0059261_0621 0.70 +0.8 662,303 - Ga0059261_0621 0.70 +0.6 662,303 - Ga0059261_0621 0.70 +0.5 662,533 + -0.6 662,533 + -0.5 662,533 + -1.2 662,533 + -1.0 662,534 - -0.9 662,585 + Ga0059261_0622 0.12 -0.7 662,585 + Ga0059261_0622 0.12 -0.4 662,679 + Ga0059261_0622 0.23 +0.1 662,680 - Ga0059261_0622 0.23 -0.9 662,809 + Ga0059261_0622 0.39 -0.7 662,810 - Ga0059261_0622 0.39 -0.4 662,810 - Ga0059261_0622 0.39 -0.5 662,810 - Ga0059261_0622 0.39 -1.6 662,812 + Ga0059261_0622 0.39 -0.4 662,812 + Ga0059261_0622 0.39 -3.0 662,812 + Ga0059261_0622 0.39 -0.6 662,812 + Ga0059261_0622 0.39 -0.1 662,812 + Ga0059261_0622 0.39 -0.9 662,813 - Ga0059261_0622 0.39 -0.4
Or see this region's nucleotide sequence