Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0410 and Ga0059261_0411 are separated by 601 nucleotides Ga0059261_0411 and Ga0059261_0412 are separated by 346 nucleotides Ga0059261_0412 and Ga0059261_0413 are separated by 78 nucleotides
Ga0059261_0410: Ga0059261_0410 - Antirestriction protein, at 393,294 to 394,379
_0410
Ga0059261_0411: Ga0059261_0411 - Uncharacterized conserved protein, at 394,981 to 395,514
_0411
Ga0059261_0412: Ga0059261_0412 - DNA-binding HTH domain-containing proteins, at 395,861 to 396,163
_0412
Ga0059261_0413: Ga0059261_0413 - N-acyl-L-homoserine lactone synthetase, at 396,242 to 396,859
_0413
Position (kb) 394
395
396 Strain fitness (log2 ratio) -2
-1
0
1
2 at 394.027 kb on + strand, within Ga0059261_0410 at 394.028 kb on - strand, within Ga0059261_0410 at 394.291 kb on + strand at 394.291 kb on + strand at 394.291 kb on + strand at 394.291 kb on + strand at 394.292 kb on - strand at 394.640 kb on + strand at 394.640 kb on + strand at 394.641 kb on - strand at 394.757 kb on + strand at 394.757 kb on + strand at 394.757 kb on + strand at 394.758 kb on - strand at 394.758 kb on - strand at 394.758 kb on - strand at 394.758 kb on - strand at 394.758 kb on - strand at 394.758 kb on - strand at 394.758 kb on - strand at 394.840 kb on - strand at 394.840 kb on - strand at 394.840 kb on - strand at 395.021 kb on + strand at 395.320 kb on - strand, within Ga0059261_0411 at 395.320 kb on - strand, within Ga0059261_0411 at 395.393 kb on + strand, within Ga0059261_0411 at 395.595 kb on + strand at 395.595 kb on + strand at 395.596 kb on - strand at 395.596 kb on - strand at 395.647 kb on + strand at 395.648 kb on - strand at 395.648 kb on - strand at 395.661 kb on + strand at 395.662 kb on - strand at 395.662 kb on - strand at 395.662 kb on - strand at 395.662 kb on - strand at 395.671 kb on + strand at 395.671 kb on + strand at 395.672 kb on - strand at 395.673 kb on + strand at 395.674 kb on - strand at 395.674 kb on - strand at 395.674 kb on - strand at 395.674 kb on - strand at 395.674 kb on - strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.830 kb on + strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 395.831 kb on - strand at 396.081 kb on - strand, within Ga0059261_0412 at 396.081 kb on - strand, within Ga0059261_0412 at 396.132 kb on + strand, within Ga0059261_0412 at 396.132 kb on + strand, within Ga0059261_0412 at 396.132 kb on + strand, within Ga0059261_0412 at 396.164 kb on + strand at 396.164 kb on + strand at 396.164 kb on + strand at 396.164 kb on + strand at 396.164 kb on + strand at 396.164 kb on + strand at 396.165 kb on - strand at 396.165 kb on - strand at 396.165 kb on - strand at 396.165 kb on - strand at 396.219 kb on + strand at 396.219 kb on + strand at 396.220 kb on - strand at 396.220 kb on - strand at 396.220 kb on - strand at 396.368 kb on + strand, within Ga0059261_0413 at 396.404 kb on + strand, within Ga0059261_0413 at 396.404 kb on + strand, within Ga0059261_0413 at 396.404 kb on + strand, within Ga0059261_0413 at 396.404 kb on + strand, within Ga0059261_0413 at 396.404 kb on + strand, within Ga0059261_0413 at 396.405 kb on - strand, within Ga0059261_0413 at 396.405 kb on - strand, within Ga0059261_0413 at 396.405 kb on - strand, within Ga0059261_0413 at 396.405 kb on - strand, within Ga0059261_0413 at 396.405 kb on - strand, within Ga0059261_0413 at 396.491 kb on + strand, within Ga0059261_0413 at 396.491 kb on + strand, within Ga0059261_0413 at 396.492 kb on - strand, within Ga0059261_0413
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 394,027 + Ga0059261_0410 0.67 +1.3 394,028 - Ga0059261_0410 0.68 -0.4 394,291 + +0.6 394,291 + -0.8 394,291 + +0.2 394,291 + +0.4 394,292 - +0.1 394,640 + +0.6 394,640 + +0.7 394,641 - -0.4 394,757 + -1.2 394,757 + -0.8 394,757 + +0.1 394,758 - -1.1 394,758 - +0.2 394,758 - +0.1 394,758 - +0.1 394,758 - -0.7 394,758 - -0.4 394,758 - -0.4 394,840 - +0.6 394,840 - +0.1 394,840 - -0.3 395,021 + -0.8 395,320 - Ga0059261_0411 0.63 +0.4 395,320 - Ga0059261_0411 0.63 +0.2 395,393 + Ga0059261_0411 0.77 -0.4 395,595 + -0.7 395,595 + +0.3 395,596 - +0.0 395,596 - -1.2 395,647 + -0.3 395,648 - +0.6 395,648 - -0.1 395,661 + -0.3 395,662 - +1.4 395,662 - +0.8 395,662 - -0.8 395,662 - +0.7 395,671 + -0.9 395,671 + -0.4 395,672 - +0.3 395,673 + -0.2 395,674 - -0.3 395,674 - -0.0 395,674 - -0.4 395,674 - +0.5 395,674 - +0.4 395,830 + -0.2 395,830 + -1.4 395,830 + -0.5 395,830 + -0.1 395,830 + -0.5 395,830 + +0.2 395,830 + -0.7 395,830 + -0.4 395,830 + +0.7 395,830 + -0.5 395,831 - +0.3 395,831 - -0.4 395,831 - +0.9 395,831 - +2.1 395,831 - +1.0 395,831 - +0.5 395,831 - -0.3 395,831 - -0.1 395,831 - -0.1 395,831 - -0.2 396,081 - Ga0059261_0412 0.73 +0.2 396,081 - Ga0059261_0412 0.73 +1.1 396,132 + Ga0059261_0412 0.89 -1.4 396,132 + Ga0059261_0412 0.89 +1.8 396,132 + Ga0059261_0412 0.89 +0.4 396,164 + +1.4 396,164 + -0.3 396,164 + +0.0 396,164 + +1.1 396,164 + +0.2 396,164 + -0.6 396,165 - -0.5 396,165 - -1.9 396,165 - -1.7 396,165 - +0.0 396,219 + +1.3 396,219 + +0.1 396,220 - -1.0 396,220 - +0.5 396,220 - +1.7 396,368 + Ga0059261_0413 0.20 -1.4 396,404 + Ga0059261_0413 0.26 +0.6 396,404 + Ga0059261_0413 0.26 +0.6 396,404 + Ga0059261_0413 0.26 -0.5 396,404 + Ga0059261_0413 0.26 -0.2 396,404 + Ga0059261_0413 0.26 +0.7 396,405 - Ga0059261_0413 0.26 -0.4 396,405 - Ga0059261_0413 0.26 +0.1 396,405 - Ga0059261_0413 0.26 -0.2 396,405 - Ga0059261_0413 0.26 -0.1 396,405 - Ga0059261_0413 0.26 +0.5 396,491 + Ga0059261_0413 0.40 +0.3 396,491 + Ga0059261_0413 0.40 +0.2 396,492 - Ga0059261_0413 0.40 -0.5
Or see this region's nucleotide sequence