Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0168 and Ga0059261_0169 are separated by 2 nucleotides Ga0059261_0169 and Ga0059261_0170 overlap by 4 nucleotides Ga0059261_0170 and Ga0059261_0171 overlap by 4 nucleotides Ga0059261_0171 and Ga0059261_0172 overlap by 4 nucleotides
Ga0059261_0168: Ga0059261_0168 - cytidylate kinase, at 155,606 to 156,247
_0168
Ga0059261_0169: Ga0059261_0169 - hypothetical protein, at 156,250 to 156,900
_0169
Ga0059261_0170: Ga0059261_0170 - Uncharacterized protein involved in biosynthesis of c-type cytochromes, at 156,897 to 157,274
_0170
Ga0059261_0171: Ga0059261_0171 - Thiol-disulfide isomerase and thioredoxins, at 157,271 to 157,798
_0171
Ga0059261_0172: Ga0059261_0172 - Cytochrome c biogenesis factor, at 157,795 to 159,729
_0172
Position (kb) 156
157
158 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 156.336 kb on - strand, within Ga0059261_0169 at 156.647 kb on + strand, within Ga0059261_0169 at 156.776 kb on + strand, within Ga0059261_0169 at 156.777 kb on - strand, within Ga0059261_0169 at 156.777 kb on - strand, within Ga0059261_0169 at 156.777 kb on - strand, within Ga0059261_0169 at 156.825 kb on + strand, within Ga0059261_0169 at 156.825 kb on + strand, within Ga0059261_0169 at 156.825 kb on + strand, within Ga0059261_0169 at 156.826 kb on - strand, within Ga0059261_0169 at 156.826 kb on - strand, within Ga0059261_0169 at 156.826 kb on - strand, within Ga0059261_0169 at 156.826 kb on - strand, within Ga0059261_0169 at 156.826 kb on - strand, within Ga0059261_0169 at 156.826 kb on - strand, within Ga0059261_0169 at 156.875 kb on - strand at 156.902 kb on + strand at 156.902 kb on + strand at 156.903 kb on - strand at 156.903 kb on - strand at 157.006 kb on + strand, within Ga0059261_0170 at 157.006 kb on + strand, within Ga0059261_0170 at 157.007 kb on - strand, within Ga0059261_0170 at 157.015 kb on + strand at 157.015 kb on + strand, within Ga0059261_0170 at 157.016 kb on - strand, within Ga0059261_0170 at 157.016 kb on - strand, within Ga0059261_0170 at 157.016 kb on - strand at 157.016 kb on - strand, within Ga0059261_0170 at 157.016 kb on - strand, within Ga0059261_0170 at 157.024 kb on + strand, within Ga0059261_0170 at 157.024 kb on + strand, within Ga0059261_0170 at 157.112 kb on + strand, within Ga0059261_0170 at 157.113 kb on - strand, within Ga0059261_0170 at 157.113 kb on - strand, within Ga0059261_0170 at 157.113 kb on - strand at 157.113 kb on - strand, within Ga0059261_0170 at 157.219 kb on + strand, within Ga0059261_0170 at 157.333 kb on + strand, within Ga0059261_0171 at 157.443 kb on + strand, within Ga0059261_0171 at 157.444 kb on - strand, within Ga0059261_0171 at 157.444 kb on - strand, within Ga0059261_0171 at 157.746 kb on - strand at 157.823 kb on - strand at 157.823 kb on - strand at 157.823 kb on - strand at 157.933 kb on + strand at 157.933 kb on + strand at 157.933 kb on + strand at 157.933 kb on + strand at 157.934 kb on - strand at 157.934 kb on - strand at 157.934 kb on - strand at 157.934 kb on - strand at 157.970 kb on - strand at 157.976 kb on + strand at 157.976 kb on + strand at 157.977 kb on - strand at 157.977 kb on - strand at 157.977 kb on - strand at 158.019 kb on + strand, within Ga0059261_0172 at 158.039 kb on + strand, within Ga0059261_0172 at 158.040 kb on - strand at 158.040 kb on - strand, within Ga0059261_0172 at 158.040 kb on - strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.180 kb on + strand, within Ga0059261_0172 at 158.181 kb on - strand, within Ga0059261_0172 at 158.181 kb on - strand, within Ga0059261_0172 at 158.181 kb on - strand, within Ga0059261_0172 at 158.181 kb on - strand, within Ga0059261_0172 at 158.181 kb on - strand, within Ga0059261_0172 at 158.183 kb on + strand, within Ga0059261_0172 at 158.183 kb on + strand, within Ga0059261_0172 at 158.184 kb on - strand, within Ga0059261_0172 at 158.196 kb on - strand, within Ga0059261_0172 at 158.196 kb on - strand, within Ga0059261_0172
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 156,336 - Ga0059261_0169 0.13 -0.3 156,647 + Ga0059261_0169 0.61 +0.6 156,776 + Ga0059261_0169 0.81 -0.2 156,777 - Ga0059261_0169 0.81 +0.7 156,777 - Ga0059261_0169 0.81 -0.5 156,777 - Ga0059261_0169 0.81 +0.3 156,825 + Ga0059261_0169 0.88 -0.4 156,825 + Ga0059261_0169 0.88 -0.7 156,825 + Ga0059261_0169 0.88 -0.4 156,826 - Ga0059261_0169 0.88 -1.5 156,826 - Ga0059261_0169 0.88 +1.1 156,826 - Ga0059261_0169 0.88 +1.1 156,826 - Ga0059261_0169 0.88 +0.4 156,826 - Ga0059261_0169 0.88 -0.2 156,826 - Ga0059261_0169 0.88 -0.4 156,875 - +0.7 156,902 + +0.5 156,902 + -0.8 156,903 - +0.5 156,903 - -0.8 157,006 + Ga0059261_0170 0.29 +2.1 157,006 + Ga0059261_0170 0.29 -1.1 157,007 - Ga0059261_0170 0.29 -1.2 157,015 + +1.1 157,015 + Ga0059261_0170 0.31 -0.9 157,016 - Ga0059261_0170 0.31 -1.6 157,016 - Ga0059261_0170 0.31 -1.5 157,016 - -0.2 157,016 - Ga0059261_0170 0.31 -1.5 157,016 - Ga0059261_0170 0.31 -2.8 157,024 + Ga0059261_0170 0.34 -2.2 157,024 + Ga0059261_0170 0.34 -2.7 157,112 + Ga0059261_0170 0.57 -2.2 157,113 - Ga0059261_0170 0.57 -1.4 157,113 - Ga0059261_0170 0.57 -2.1 157,113 - +1.1 157,113 - Ga0059261_0170 0.57 -2.1 157,219 + Ga0059261_0170 0.85 -0.1 157,333 + Ga0059261_0171 0.12 -1.5 157,443 + Ga0059261_0171 0.33 -1.7 157,444 - Ga0059261_0171 0.33 -1.9 157,444 - Ga0059261_0171 0.33 -0.9 157,746 - -0.7 157,823 - -0.3 157,823 - +0.6 157,823 - -0.2 157,933 + -0.7 157,933 + -1.8 157,933 + -1.5 157,933 + -1.2 157,934 - -0.9 157,934 - -0.5 157,934 - -0.7 157,934 - -2.4 157,970 - -1.2 157,976 + +0.1 157,976 + -0.9 157,977 - -2.1 157,977 - -0.5 157,977 - -1.4 158,019 + Ga0059261_0172 0.12 -0.5 158,039 + Ga0059261_0172 0.13 -2.1 158,040 - -0.5 158,040 - Ga0059261_0172 0.13 -1.5 158,040 - Ga0059261_0172 0.13 -1.2 158,180 + Ga0059261_0172 0.20 -1.6 158,180 + Ga0059261_0172 0.20 +0.4 158,180 + Ga0059261_0172 0.20 -0.1 158,180 + Ga0059261_0172 0.20 -1.2 158,180 + Ga0059261_0172 0.20 -0.5 158,180 + Ga0059261_0172 0.20 -2.2 158,180 + Ga0059261_0172 0.20 -1.9 158,180 + Ga0059261_0172 0.20 -1.0 158,180 + Ga0059261_0172 0.20 -0.5 158,181 - Ga0059261_0172 0.20 -2.6 158,181 - Ga0059261_0172 0.20 -0.5 158,181 - Ga0059261_0172 0.20 -1.5 158,181 - Ga0059261_0172 0.20 -1.9 158,181 - Ga0059261_0172 0.20 +0.2 158,183 + Ga0059261_0172 0.20 -0.5 158,183 + Ga0059261_0172 0.20 -1.9 158,184 - Ga0059261_0172 0.20 +1.1 158,196 - Ga0059261_0172 0.21 -3.7 158,196 - Ga0059261_0172 0.21 -1.2
Or see this region's nucleotide sequence